| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5123 |
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| Symbol | |
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| ID | 4453802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 2156236 |
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| End bp | 2158278 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639697179 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_838749 |
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| Protein GI | 116693216 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0328449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGATG ACGTAGAGCA GGCGGCCGGG TCACGGGCCG CGCATCCCGC CGGCTGGCCC
GCGCCGTCGA TCCAGAAGGC CCATGAGCGC TCGGAGACGT TCGGCCTGCA GGTATCGGCG
CGGCCCGACT ACGACGTGCT GTCGAACGCG GCGCTGGTGC TCAAGCGCGA GCAGAGCCGG
GTGCTGTGCG TACACGCGAT GCCGGTGATG GAGACGCTGC ACGAGCAGAT CGTCAACACG
CAGAGCATGA TCGTGCTGAC CGATGCGGAA GGGCTGATCC TGCATTCGAT CGGCGACGAC
GATTTCCTGC GCCGCGCGGA GAAGGTCGCG CTGCGCCCGG GCGCGAACTG GGCGGAGAAC
CGGCAAGGCA CCAACGCGAT CGGCACGGCG CTGGCCGAGC TGTGCCCGAT GGTCGTCCAC
GGCGACCAGC ACTTCCTGGC CGCGAACCGC TTCCTGACCT GTTCGAGCGT GCCGATCCTC
GATCCGTACG GCGACGCGAT CGGCGTGCTC GACGTGACGG GCGACCACCG CAGCTATCAC
CAGCACACGA TGGCGCTCGC GAAGATGTCG GTGCAGATGA TCGAGAATCA CCTGTTTACG
ACGACCTTTC AGGAAACGCT GCAGGTGTCG TTCCATGGCC GCCCCGAATT TCTCGGCACG
CTGATGGAGG GGATCGTCGC GTTCACCGCC GATGGCCGCT TCCTGTCGGC CAATCGCAGC
GCGCAGTTCC AGCTCGGCAT GCCGCTCGCC GCGCTGCGCG CGCACACGCT GTCGTCGCTG
TTCGACGTCA CCAGCGCCCA GCTGATCGAC CGCATGCGCG CGAGCACCGA CCGGCACCTG
ATGCTCAATC TCGGCAACGG CGCGGTGGTC TGCGCGCGCG TGCACTTCCG CCGCGCGACG
CTCGCCGAAG GCAGCCGGCC GACGGACGTC CACGACGCGG GCGCGCCGGC CGCGCGCGCG
AACGCGGTGC CCGCGCCGGC GGCGGGCACG TCGGCCGGCC TGTCGCGGCT CAACTATCTC
GACACCGGCG ATGCGCAGGT CGCCAGCGTG ATCGCGAAGG TGCGCAAGGT GATCGGCAAG
GACATCCCGA TCCTGATCAC CGGCGAGACC GGCACCGGCA AGGAACTGCT CGCGCAGGCG
ATCCACAACG ACTCGCCGCG CCGCGACGCG CCGTTCGTCG CGGTCAACTG TGCGTCGATT
CCGGAGACGC TGATCGAGTC CGAGCTGTTC GGCTACGAGG AGGGCGCGTT CACCGGCGCG
CGCCGCAAGG GGGCGATCGG CAAGCTGCTG CAGGCGAACG GCGGCACGCT GTTCCTCGAC
GAGATCGGCG ACATGCCGTA TCCGCTGCAG GTGCGGCTGC TGCGCGTGCT GCAGGAGCGC
CTCGTCAACC CGCTCGGGTC GACGAAGACG ATCGCCGTCG ACATCGCGAT CATCTGCGCG
ACGCACCGCG ACTTGCGCGA GATGATCGCG CAGAACCGTT TCCGCGAGGA TCTCTACTAC
CGGCTGAACG GCCTCGTGGT GCGCCTGCCG CCGTTGCGCG ACCGCACGGA TCTCGCGGTC
GTCGTGCAGA AGATGCTGCA GCGCGAAGCG TTCGCGGGCC CGGGCCGGCC GCCGCTGTCG
GTGGCGCCGG ACGTGATGGA GTTGTTCGTG CGGTGCACGT GGCCGGGCAA CTTCCGCCAG
CTCGGCAACC TGCTGCGCAC GGCGGCCGCG ATGGTCGACG ACGACGGCGA AATCCGGCGC
GAGCACCTGC CCGACGACTT CTTCGACGAC CTGCGGCGCG GCGATGCGCA CGTCGGGCAC
GCAGGGCAGG CGGCGCCCGA TTCGCCTGCC GCGGCGAGCG CCGGCCCTTG CGTCGCGGAC
GCGTTGCCGC CCGCCGACGC GCGCCTGCAG GACGTCGCCG CCTCCGCGAT CGCCGCCGCG
CTCGCGCGTC ATGGCGGCAA CGTGTCCGCC GCGGCGCGCG CGCTCGGCGT CTCGCGCAAC
ACGATCTACC GGAAGATGCC GGCCGCCGAC GCGGGACGCC AGCCGTCGTC CGACGAAGAC
TGA
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| Protein sequence | MRDDVEQAAG SRAAHPAGWP APSIQKAHER SETFGLQVSA RPDYDVLSNA ALVLKREQSR
VLCVHAMPVM ETLHEQIVNT QSMIVLTDAE GLILHSIGDD DFLRRAEKVA LRPGANWAEN
RQGTNAIGTA LAELCPMVVH GDQHFLAANR FLTCSSVPIL DPYGDAIGVL DVTGDHRSYH
QHTMALAKMS VQMIENHLFT TTFQETLQVS FHGRPEFLGT LMEGIVAFTA DGRFLSANRS
AQFQLGMPLA ALRAHTLSSL FDVTSAQLID RMRASTDRHL MLNLGNGAVV CARVHFRRAT
LAEGSRPTDV HDAGAPAARA NAVPAPAAGT SAGLSRLNYL DTGDAQVASV IAKVRKVIGK
DIPILITGET GTGKELLAQA IHNDSPRRDA PFVAVNCASI PETLIESELF GYEEGAFTGA
RRKGAIGKLL QANGGTLFLD EIGDMPYPLQ VRLLRVLQER LVNPLGSTKT IAVDIAIICA
THRDLREMIA QNRFREDLYY RLNGLVVRLP PLRDRTDLAV VVQKMLQREA FAGPGRPPLS
VAPDVMELFV RCTWPGNFRQ LGNLLRTAAA MVDDDGEIRR EHLPDDFFDD LRRGDAHVGH
AGQAAPDSPA AASAGPCVAD ALPPADARLQ DVAASAIAAA LARHGGNVSA AARALGVSRN
TIYRKMPAAD AGRQPSSDED
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