Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5111 |
Symbol | |
ID | 4453790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 2145553 |
End bp | 2147322 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639697167 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_838737 |
Protein GI | 116693204 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGTCG AGTTGTTCGC GCAGCATCAC GCTTGCCCCG GCTGGCAGGG CGACATGGCC CGACGCATTA CCGCATTCGA CTGGTCGGCC ACCGGGCTCG GCCCGCTCGA CGGCTGGTCC GCCAGCCTCG TCGCGGCCGT CCGCACCGTG CTCGCCTCGC CGCTGCCGCT GGTGATGCTG TGGGGCCGCC CCGGCTACAT GATCTACAAC GACGCGTATG CCGGATTCGC CGGCGGCCGT CACCCGTATC TGCTCGGTCA GCCGGTCGAA CTCGGCTGGC CCGAAGTCGC CGATTTCAAC CGAAACGTGA TGAACACCTG CCTCGCCGGC GGCACGCTGT CCTATCGCGA CAAGGCCCTC GTGCTGCTGC GCAGCGGCCG CCCGGAAGAT GTCTGGATGG ATCTGCACTA TAGCCCGCTG CCCGACGACG AGGGTGCACC GGGCGGCGTG CTCGCCGTCG TGGTCGAGAC CACCGAGCGC GTGCTCGCCA CGCGCCATCG CGATCGCGCG GAAGCGGCGC TGCAGGCCTC CAATGCCGAG CTGCGCGAGC TGACTGAAAC GCTCGAACAG CGCGTGACCG ACGCGATCGC CGAGCGTGCG GCGATCGAGG AGCAGTTGCG TCACGCCCAG AAGATGGAAG CGATCGGCAA CCTGACCGGC GGCATCGCGC ACGACTTCAA CAACGTGCTG CAGGTGATCA GCGGCAACCT GCAGATCCTC TCCGTCGAAC TCGGCGCCCA TGCGAGCGCG CAGCCGCGGA TCGAGAACGC GAACAATGCC GTGCGGCGCG GCGCGCAACT GGCGTCGCAC CTGCTCGCGT TCGCGCGACG CCAGCCGCTT GCGCCGACCA CGCTGAACCC GTGCCGGCTG ATCGACGGCA TGAACGAGAT GCTGCACCGC GCGCTCGGCG AAACCGTGCG GATCGTCTCC GCGCTGGCGC CCGACGTCGG CAACGTGCTC GCCGACCGGC ACCAGCTCGA AAACGCGCTG CTGAATCTCG CGATCAATGC GCGCGATGCG ATGCGCGGCG GCGGCACGCT GACGATCGCC GCGTACAACA GCACGCAGCC CGGCCACGCG GCCGGCACGC GCGGCACAAC GATGCCGCCC GGCGAATACG TGACGTTCGA GATCGCCGAC ACGGGCATCG GCATGACGGC CGACGTGCTC GAACGGGTCT TCGAACCCTT CTTCACGACC AAGCCGGACG GCGAAGGCAC CGGGCTCGGG CTCAGCATGG TGTTCGGTTT CGTCAAGCAG AGCGGCGGCC ACGTGTCGAT CGACAGCACG CCCGGCCAGG GCACCACCGT GCGCCTCACG TTTCCGCGCT GCCACGAGGC AGCCGACGAA CCTGCCCGCA CGCCGCAGCA CGACGCGGTG CGCGGCCGCG AAACGATCCT CGTCGTCGAG GACGATGCGG ATGTCCGGCT GACGGTGGTC GACATGCTCG CGCAGCTCGG CTACAAGGTC ATCACGGCGT CCGACGGCGA AGCCGCGCTG CGCGTGCTCG ACAGCGAAAC GCCGATCGAT CTGCTGTTTA CCGACGTGAT CATGCCGGGC CGCGTGAAGG GCGGCGAACT CGGACGCCGC GCCGCGCTGC GCAAGCCGCC GTTGCCGGTG CTGTTCACGT CCGGCTATAC GCGCGACGAA ATCTTCCACG CGGGGCGGCT CGACCCCGGC GTGATGCTGC TCGGCAAGCC GTACCGGCGC GACGAACTCG CGGCCCGGAT TCGCAGCGTG CTCGATGCGC AGCAGGCCGA CGCGGCATGA
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Protein sequence | MHVELFAQHH ACPGWQGDMA RRITAFDWSA TGLGPLDGWS ASLVAAVRTV LASPLPLVML WGRPGYMIYN DAYAGFAGGR HPYLLGQPVE LGWPEVADFN RNVMNTCLAG GTLSYRDKAL VLLRSGRPED VWMDLHYSPL PDDEGAPGGV LAVVVETTER VLATRHRDRA EAALQASNAE LRELTETLEQ RVTDAIAERA AIEEQLRHAQ KMEAIGNLTG GIAHDFNNVL QVISGNLQIL SVELGAHASA QPRIENANNA VRRGAQLASH LLAFARRQPL APTTLNPCRL IDGMNEMLHR ALGETVRIVS ALAPDVGNVL ADRHQLENAL LNLAINARDA MRGGGTLTIA AYNSTQPGHA AGTRGTTMPP GEYVTFEIAD TGIGMTADVL ERVFEPFFTT KPDGEGTGLG LSMVFGFVKQ SGGHVSIDST PGQGTTVRLT FPRCHEAADE PARTPQHDAV RGRETILVVE DDADVRLTVV DMLAQLGYKV ITASDGEAAL RVLDSETPID LLFTDVIMPG RVKGGELGRR AALRKPPLPV LFTSGYTRDE IFHAGRLDPG VMLLGKPYRR DELAARIRSV LDAQQADAA
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