| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5108 |
|---|
| Symbol | |
|---|
| ID | 4453787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 2142629 |
|---|
| End bp | 2143390 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639697164 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_838734 |
|---|
| Protein GI | 116693201 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1511] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGGC AAGGAATTCG CGCGATCTAC CGCGCAGAAA TGGCCCGCAC GCGCCGCACG
CTGATGCAGA GCATCATCGC GCCGGTGATC TCGACGTCGC TGTATTTCGT CGTGTTCGGC
TCCGCGATCG GCTCGCGCAT CAGCGACGTG AACGGCATCG GCTACGGGTC GTTCATCGTG
CCGGGCCTCG TGATGCTGTC GCTGCTGTCG CAGAGCATCT CGAACGCGTC GTTCGGCATC
TACTTCCCGC GCTTCACCGG CACGATCTAC GAGATCCTGT CCGCGCCCGT GTCGTACTGG
GAGATCGTGA TCGCGTACGT CGGCGCGGCC GCGTCGAAGT CGATCCTGCT CGGCGTGATC
ATCCTTGCCA CGGCCGGCCT GTTCGTGCCG CTGCACATCC TGCATCCGTT CTGGATGGTG
CTGTTCCTGG TGCTGACGGC CGTCACGTTC AGCCTGTTCG GCTTCGTGAT CGGCATCTGG
GCCGACAGCT TCGAGAAACT GCAGCTCGTG CCGCTGCTGA TCATCACGCC GCTCACGTTC
CTCGGCGGCA GCTTCTATTC GGTCGACATG CTGCCGCCCG CGTGGCGCGT CGTCACGCTG
TTCAACCCGA TCGTCTACCT GATCAGCGGC TTTCGCTGGT CGTTCTACGG GATCGCCGAC
GTGCATGTGT GGATCAGCCT CGCCGCGACC GCGCTGTTCC TCGTGATCCT GCTCGCGATC
GTCGCGTGGA TGTTCCGCAC CGGCTACAAG CTGAAGAATT GA
|
|---|
| Protein sequence | MNWQGIRAIY RAEMARTRRT LMQSIIAPVI STSLYFVVFG SAIGSRISDV NGIGYGSFIV
PGLVMLSLLS QSISNASFGI YFPRFTGTIY EILSAPVSYW EIVIAYVGAA ASKSILLGVI
ILATAGLFVP LHILHPFWMV LFLVLTAVTF SLFGFVIGIW ADSFEKLQLV PLLIITPLTF
LGGSFYSVDM LPPAWRVVTL FNPIVYLISG FRWSFYGIAD VHVWISLAAT ALFLVILLAI
VAWMFRTGYK LKN
|
|---|
| |