Gene Bcen2424_5107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5107 
Symbol 
ID4453786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2141682 
End bp2142632 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content67% 
IMG OID639697163 
ProductABC transporter related 
Protein accessionYP_838733 
Protein GI116693200 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGA TCCTTTCCGT CTCCGACCTC TCCAAGACTT ACGCGTCCGG CTTCCAGGCG 
CTGAAGCACG TGACCCTCGA CATCCGCCCC GGCGAGATCT TCGCGCTGCT CGGGCCGAAC
GGCGCCGGCA AGACGACGCT GATCGGCTCG ATCTGCGGCA TCGTCACGCC GACCGAAGGC
CGCGTGACGG TCGGCGGCCA CGACATCCGC GATCAATATC GCGCCGCCCG CGAAATGATC
GGCCTCGTGC CGCAGGAGCT GACCACCGAC GCGTTCGAAA CCGTCTGGGC GACCGTGTCG
TTCAGCCGCG GCCTGTTCGG CAAGGCGCCC GATCCCGCGT ACATCGAGAA GACGCTCAAG
GCGCTGTCGC TGTGGGACAA GCGCGACAAC AAGCTGATGA CGCTGTCGGG GGGCATGAAG
CGCCGCGTGA TGATCGCGAA GGCGCTGTCG CACGAGCCGC GCATCCTGTT CCTCGACGAG
CCGACGGCCG GCGTCGACGT CGAGCTGCGC CGCGACATGT GGAAGCTCGT CGATTCGCTG
CGCGAAAGCG GCGTGACGAT CCTGCTGACC ACGCACTACA TCGAGGAAGC CGAGGAGATG
GCCGACCGGA TCGGCATCAT CCTCGGCGGC GAGCTCGTGC TCGTCGAGGA AAAGCGCGAA
CTGATGCGCA AGCTCGGCAA GAAGCAGCTC ACCGTGCAGC TCGAGCACCC GCTCGCCGAC
ATGCCGCCCG CGCTCGCGCC GTTCGGGCTC GAACGCGCGG AAGACGGCGC CGCGCTCGTC
TATACGTACG ACTCGCAGCG CGACGACGCG AGCATCGCGA AGCTCATCAA CGCGCTCGGC
TCGGCCGGCA TCGGCTTTCG CGACCTGCAC ACGACGCAGA GCTCGCTGGA GGACATTTTC
GTCAGCCTGA TCGACAACCG CCGCAACGGC GTGCAAGGAG CCGGCGCATG A
 
Protein sequence
MQPILSVSDL SKTYASGFQA LKHVTLDIRP GEIFALLGPN GAGKTTLIGS ICGIVTPTEG 
RVTVGGHDIR DQYRAAREMI GLVPQELTTD AFETVWATVS FSRGLFGKAP DPAYIEKTLK
ALSLWDKRDN KLMTLSGGMK RRVMIAKALS HEPRILFLDE PTAGVDVELR RDMWKLVDSL
RESGVTILLT THYIEEAEEM ADRIGIILGG ELVLVEEKRE LMRKLGKKQL TVQLEHPLAD
MPPALAPFGL ERAEDGAALV YTYDSQRDDA SIAKLINALG SAGIGFRDLH TTQSSLEDIF
VSLIDNRRNG VQGAGA