| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5091 |
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| Symbol | |
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| ID | 4453667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 2121355 |
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| End bp | 2122545 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639697147 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_838717 |
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| Protein GI | 116693184 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0715741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCACG ACAACCTCCA TTCCGCCGCG CCGCCGGCCG CACTGAACGA CCCGGCGCTC
GACGCGCGCC GCGCGACGCG CCGCAAGCGC TTCACCGTGT TCTTCGCGAT CGTGCTGCTG
GCCGCGATCG CATGGATCGC CTACTGGCTG CTGAGCGACC GCTATTACGA AGACACCGAC
GACGCATACG TCGCGGGCAG CATCGTGCAG GTCGCCGCGC AGATCCCGGG CGCCGTGACC
GACGTGGTGG TCGCCGATAC GCAAGCCGTG CGCGCCGGGC AGACGCTCGT GCGGCTCGAC
GACACCGAGG CATCCGTCGC GTTCGCGCAG GCGAAGGCGC AGCTCGCGCA GGCCGTGCGC
CAGGTCGCGA ACGCGAGGAT TTCGAACACG ATGTACGTCG AGGCCGTGAA TGCGCGCCGC
GCCGACCTGT CGCTGGCGCA GCGCGCGCTC GCCGCGCGTT CGGGCGCATC GGTCGAGATC
GTCGCGCCGG AAGAACTGGC GCGGGCGCGC GCGGCGGTGG CCGGCGCGCA GGCGAACCTC
GCGGCCGCGC AGGCGCAGCT CGACGCGGCG CGCGCGCTCG GCAGCAAGCT GCCCGTCGAC
GAAAGCCCGG CGGTCGTGCA GGCGGCCGCG CAGTTCAAGC TCGCGTACCG GAACCTGAAG
CGCACGACGA TCGTCGCGCC CGTCGACGGC ACGATCGGGC AGCGCTCGGT ACAGGTCGGC
CAGCAGGTCG GGCCCGGCGT GCCGCTGATG TCGATCGTGC AGCTCAACCG GCTGTGGGTC
GAGGCGAATT TCAAGGAAGG GCAGATTCGC CACATGCGCG TCGGGCAGCC GGTCGAGGTC
GTGTCGGATC TCTACGGCTC GCGCATCGCC TATCGCGGCC GTGTGCAGGG CTTCTCGGCC
GGCACGGGCA GCGCGTTCTC GATGCTGCCG TCGCAGAACG CGGCCGGCAA CTGGATCAAG
GTCGTGCAGC GCGTGCCGGT GGTGATCGCG CTCGATCCGC GCGACCTCGC CGCGCATCCG
CTGCGCGTCG GGCTGTCGAT GCGCGCGACG GTCGACACGC ACGACCGCAA CGGTCACGCG
CTCGACAGCG AGCCGCCGAC GCCGGCCGTC AGCACGCGCG TGCACGACGG CGTCGCGAGC
GACGCGGAAG CGGCCGCCGC CGCGATCATC CGCGAGAATC AGGGCGGGTG A
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| Protein sequence | MHHDNLHSAA PPAALNDPAL DARRATRRKR FTVFFAIVLL AAIAWIAYWL LSDRYYEDTD
DAYVAGSIVQ VAAQIPGAVT DVVVADTQAV RAGQTLVRLD DTEASVAFAQ AKAQLAQAVR
QVANARISNT MYVEAVNARR ADLSLAQRAL AARSGASVEI VAPEELARAR AAVAGAQANL
AAAQAQLDAA RALGSKLPVD ESPAVVQAAA QFKLAYRNLK RTTIVAPVDG TIGQRSVQVG
QQVGPGVPLM SIVQLNRLWV EANFKEGQIR HMRVGQPVEV VSDLYGSRIA YRGRVQGFSA
GTGSAFSMLP SQNAAGNWIK VVQRVPVVIA LDPRDLAAHP LRVGLSMRAT VDTHDRNGHA
LDSEPPTPAV STRVHDGVAS DAEAAAAAII RENQGG
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