| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5088 |
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| Symbol | |
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| ID | 4452972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 2117446 |
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| End bp | 2118882 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639697144 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_838714 |
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| Protein GI | 116693181 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.122241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCT ATGCGGTGCT GGCGCAGACG ATCGCCGACG CGATCCGGCG CGGCGACCTG
GCGGCCGGCG CGCGCATCCC TACCGTGCGC GCGGCATGCC GCGCGTATCG GGTGAGCCCG
TCCACGGTGT TTCGTGCGTA CTACGCGCTC GAAAGCGAGG GCCTGATCGT CGCGCGGGCG
CGCTCGGGTT ATTTCGTGGC GAACGTCGCG GACAAGCACG TGCGGTTCGG CCGCGATTCG
CCGCGCAAGC CGGGCGCCGC GCAGAACGAC GCCGCTCGAA CCGGCGACGA CGATGCGCTG
TTCCGCCTGC TCGACTCGCT CAAATGCGAC GACATCGTGC CGCTCGGCTC GGCATTCGCG
AGCTATTCGC TGTTCCCGAT GAGCAGCCTG TGGCGCCAGG TGGCGTCGGC CGCTCGCCAC
ATGGACCGCA CCAAACTGCT CGAAGGCTTG CCGCCCGGCA ACGAAGCACT GCGCCGCCAG
ATCGCGTTGC GCTATCTGAA CGCGGGCGCG TCGCTGCCGC TGGAGGAAAT CGTCATCACG
ACGGGCGCGA CCGAAGCGCT GACGCTCAGC TTGCAGGCGC TGACGCGCCC GGGCGACATC
GTCGCGATCG AACGGCCGGC CTTCCACGCG GTGCTGCAGG CCGTCCAGTG CCTGCATCTG
AAGGCCGTCG AGATTCCGGT CGACCCGCGC ACGGGCCTCG ACCTCGACGC GCTCGCCGAG
GCGCTCGACA CGCATCCGGT ACGCGCATGC TGGTTCATGA CGTCATTCCA CAACCCGACC
GGCGCGACGC TGACCGACGA GCGCAAGCGC GCGCTGATCG ACCTGCTCGC GTCGCGCGGC
GTGCCGCTGA TCGAGGACGA CGTGTATGGC GAACTGCAGT TCGGCACGGC GCCCACGCGG
CCCGCGAAAC TGTATGACGA CAGCGGACTC GTCCTGCATT GCGGATCGTT CTCGAAATGT
CTCGCGCCCG GGTTCCGAAT CGGCTGGGTC GCGGCCGGCC GCTTCGTCCG GCAGATCCGC
GAGGCCAAAG GCACGAGCAC GCCGGCCGCC GACGTACCTG CGCAGATGGC GATAGCGAGC
TATCTGCGCG ACGGCGCATA CGACCGGTTC CTGCGCAAGC TGCGACGCAA TCTCGCCGCG
CACCAGGCGC AAATGCTGTC GGCCGTGCGC GCGTATTTCC CGACGGATAC CGAAGTGTTC
GCGCCGCGCG GCGGGTATTT CCTTTGGATC GAATTGCCGC CGCACCTGGA CGCGATGCAC
CTGTTCGACG ACGCGATGGA AAGCGGCGTC AGCATTGCGC CCGGGCCGAT CTTCTCCGCC
ACCGGCGGTT TTCGCCGCTA TTTGCGGCTC AACTACGGGC GGCCGTGGAC CCCGGCCGTC
GAGCGCGCGC TGGAGACGCT CGGCACGCTC GCGGCCCGGC AGCGGCACGG CGGCTAG
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| Protein sequence | MKRYAVLAQT IADAIRRGDL AAGARIPTVR AACRAYRVSP STVFRAYYAL ESEGLIVARA
RSGYFVANVA DKHVRFGRDS PRKPGAAQND AARTGDDDAL FRLLDSLKCD DIVPLGSAFA
SYSLFPMSSL WRQVASAARH MDRTKLLEGL PPGNEALRRQ IALRYLNAGA SLPLEEIVIT
TGATEALTLS LQALTRPGDI VAIERPAFHA VLQAVQCLHL KAVEIPVDPR TGLDLDALAE
ALDTHPVRAC WFMTSFHNPT GATLTDERKR ALIDLLASRG VPLIEDDVYG ELQFGTAPTR
PAKLYDDSGL VLHCGSFSKC LAPGFRIGWV AAGRFVRQIR EAKGTSTPAA DVPAQMAIAS
YLRDGAYDRF LRKLRRNLAA HQAQMLSAVR AYFPTDTEVF APRGGYFLWI ELPPHLDAMH
LFDDAMESGV SIAPGPIFSA TGGFRRYLRL NYGRPWTPAV ERALETLGTL AARQRHGG
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