Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5073 |
Symbol | |
ID | 4452957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 2097805 |
End bp | 2098710 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639697129 |
Product | LysR family transcriptional regulator |
Protein accession | YP_838699 |
Protein GI | 116693166 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR03418] putative choline sulfate-utilization transcription factor |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAC CCGAACCGTT ACCGTCGATG CAGGCGCTGC GCGCGTTCGA ATCGGCTGCC CGGCTGGCGA GCTTCACGGC CGCCGCGCGC GAGCTCGGCT CGACGCAGCC GGCCGTGAGC CAGCAAGTGT TCCAGCTCGA AGCCGAACTC GGCGTGCCGC TGTTCGAACG CAGCCCGCGC GGCGTCACGC TGACGGCCGA CGGCCAGTGC CTGTACGAAG CCGTGCGGCT GAGCCTCGAC ACGCTGCGCG GCGCAACCGC GACGTTGCGC GCGCGCCGCG AGCACGGCGC ACTCACGATC GTCACCGACT TCGGTTTCGC GACCTACTGG CTGATGCCGC GCCTGGCCGG GCTGAAACGC GTGATGCCGG ACGTCGACGT GCGCGTCGTC ACGTCACAGG ATTACGACGC GCAACGCGAC CACGGCGACA TCGCGGTCCT GTTCGGCGAC GGTCACTGGC CGTCGTGCAC GGCCGCGCGG CTGTTTCCGG AATCCGTCAC GCCCGTCTGC TCGCCCGCGT TCCGCGATGC GCACCGGGGC GTCGCGCGGG CCGAGCACCT GCTCGCGCTG CCGCTGCTGC ACGTACAGCC GACGCGCCCC GAGCGCTGGC TGTCGTGGTC GGGCTGGTTC GACGCGCACG GGCTCGAATC GCCGGCCGCC ACCCGCGGCG TGACCTTCAA CAGCTATGCG CTCGTGATCC ATGCGGCGCT GCTCGGCGAA GGCGTCGCGC TCGGCTGGGC GCCGCTCGTC GACGAACTCG TCGCGGCCGG CCAGCTCGTG AAGCTGGTCG ATGCGCCCGT CGTCACGTCG CGCGGCTACT TCCTGGTGCG CCCGCCACAG CGGCCCGAGC CGGACGCGAC CCACGTGTTC CGGCGCTGGC TGCTCGACGC GTGCGCGGCG GCCTGA
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Protein sequence | MSKPEPLPSM QALRAFESAA RLASFTAAAR ELGSTQPAVS QQVFQLEAEL GVPLFERSPR GVTLTADGQC LYEAVRLSLD TLRGATATLR ARREHGALTI VTDFGFATYW LMPRLAGLKR VMPDVDVRVV TSQDYDAQRD HGDIAVLFGD GHWPSCTAAR LFPESVTPVC SPAFRDAHRG VARAEHLLAL PLLHVQPTRP ERWLSWSGWF DAHGLESPAA TRGVTFNSYA LVIHAALLGE GVALGWAPLV DELVAAGQLV KLVDAPVVTS RGYFLVRPPQ RPEPDATHVF RRWLLDACAA A
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