| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5070 |
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| Symbol | |
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| ID | 4452524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 2093603 |
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| End bp | 2094742 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639697126 |
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| Product | porin |
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| Protein accession | YP_838696 |
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| Protein GI | 116693163 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.58235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATA CGAAAGTTGC CGTAGCCGCC GCGCTTGCAT GCGCGGCCTG TATTCCCGCC
GTCGGACATG CGCAAAGCAG CGTGACGCTG TACGGGATTC TCGACGCGGG TATCACGTAC
GTGAACAACA CGGGCGGTTC GCACGTGGTC AAGTTCGACG ACGGCGTCGC CTACGGGAAC
CGCTTCGGCC TCAAGGGCAC CGAAGACCTG GGCGGCGGCC TGAAGGCCGT GTTCACGCTC
GAGAGCGGCT TCCATCTCGG CAACGGGCAA CTCGGCTTCG GCGGCGCGGA ATTCGGCCGT
CAGGCGTATG TCGGCCTGCA GAACGACTGG GGCACGCTGT CGTTCGGCAA CCAGCTCGAC
ATCACCAACG AACTCGTATC GATCTACAAC ATCTCGGCGT GGGGCAGCGG CTACGCGATC
CACCAGGGCG ACTTCGACCG CTTCAACGGC GACCGCCTGC CGAACTCGGT GAAGTTCCTG
TCGAACGACC TGAGCGGCTT CAAGTTCGGC GCGATGTACT CGTTCGGCAA CGTCGCGGGC
AACTTCCATC GCAACAGCGC ATGGAGCGCG GGCGCGAGCT TCACGAAGGG TGACTTCTCG
ATCGGCGCCG CGTACACGCG CCTGAACAAC CCGAACGGCA TCTACGCGTT CGATCCGTAC
GCGATGATCG GCACGCACAC GTTCCTCGGC CAGCAGACCG TCACCGTCGA TCCGGCGACC
GGCGCGCGCA CCGACCTGTT CGCGAACACG CCGATGGACG TCGACAGCCA GGGCACGTTC
GGCATCGGCA CCAGCTACAC GATCGGCAAG CTGACGCTCG ACGCCAACTA CTCGTACACG
ACGATCAAGG GCTTCGGCCA GTCGTCGCAC ATGCAGGTGT ACGAAGGCGG CGGCCTGTAC
CAGTTCACGC CGGCGCTGAG CTTCATCGCG GGCTACCAGC ACACGCGCTT CGAAGGCCAT
CACTGGAACC AGGGCACGGC GGGCCTGCAT TACCTGCTGT CGAAGCGCAC CGACATCTAC
ATCTCCGGCG ATTACCTGCG CGCGTCGCAG GGCGTCGATG CGGTGGTCGG CTACAGCTTC
ACGCCGTCGA CGACGCAGAC GCAGGCCGAC GTGCGGATCG GGATGCGGCA TTCGTTCTGA
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| Protein sequence | MKHTKVAVAA ALACAACIPA VGHAQSSVTL YGILDAGITY VNNTGGSHVV KFDDGVAYGN
RFGLKGTEDL GGGLKAVFTL ESGFHLGNGQ LGFGGAEFGR QAYVGLQNDW GTLSFGNQLD
ITNELVSIYN ISAWGSGYAI HQGDFDRFNG DRLPNSVKFL SNDLSGFKFG AMYSFGNVAG
NFHRNSAWSA GASFTKGDFS IGAAYTRLNN PNGIYAFDPY AMIGTHTFLG QQTVTVDPAT
GARTDLFANT PMDVDSQGTF GIGTSYTIGK LTLDANYSYT TIKGFGQSSH MQVYEGGGLY
QFTPALSFIA GYQHTRFEGH HWNQGTAGLH YLLSKRTDIY ISGDYLRASQ GVDAVVGYSF
TPSTTQTQAD VRIGMRHSF
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