Gene Bcen2424_5066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5066 
Symbol 
ID4452520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2088554 
End bp2090266 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content68% 
IMG OID639697122 
Productpropeptide, peptidase M4 and M36 
Protein accessionYP_838692 
Protein GI116693159 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3227] Zinc metalloprotease (elastase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAT CACGCAAAGC ATTGCCGCTC GCCCTGAGTC TCGCGCTCGG TTTCGGCATC 
GTCGGCGGCA CCCTGGCCGA TACGAAAGTG TCGAATCCGC AGGCCGCCAG CCTGCGCGAA
AGCCTGACGC GCGGCGTCGC GCCGCCGGCC GCGAAAGCCG ATACGGCCGC CGGGCAATTC
CGCGCGGACG GCGTCGCCGT CACGCTGTAC AACCCGGCCT GGCGCGTCAA GAAAGCCGCC
GCGACGCCCG CCGCCACCGC GCGCGACTTC GTCGCGTCGC AAGCGGCGCA GCTCGGCCTC
GACGCGGCGG CGCTCGCGAG CCTCGTCGTC ACGTCGGAAC GCAACGATGC CGACTTCACC
GTCGTGCGCC TGCAGCAGCA GGCTGCCGGG CTACCCGTGT ACGGCAGCGA CATCGCGGTG
ACCGTCGCGA AGGACGGCCG CATCCTGTAC GTCGCAAGCA ACACGATCAG CGGCGTGGTC
GCGACGACGC GCAAGTCGCA GGCCGTCGAC CAGCAGCAGG CGCTCGACCG CGCCCGCGCG
TATCTCGGCG TGAGCGGCTT CACGCATCTC GACGCCCAGC TCGTCGCATT CGTCGACCAG
GCCGGCACGC ACACCGCGTG GAAGGTGCGC GGCCGCCCGC AGGACGGCCC GAAGGGCGAC
TGGGAACTGC TGATCGATTC GGGTAGCGGC GAAGTGCTGC GCGCCGAGGA CAAGGCGTTC
TACGCGACCG ACGGCACCGG CTTCGTGTTC CGCCCCGATC CGCTGTCGCC GACGAAGAGC
AGCTACGGCA GCACCGGCTA CAAGGACAGC AGCGACGCCG ATTCGACGCA ACTCACGGCC
GCACGCGTGC GCGTGACGCT GAAGGAGCTC GCGCAGTCGG GCACGCGCTA CACGCTGACG
GGCCCGTACG CGGCATGCAT CGATTTCGAT GCGCCGCTCG ACAAGGCGTG CCCGTCGCAG
TCCACGCCCG CGTTCGAATT CACGCGCGGC AACCTGTATT TCGAGGCCGT GAACGCGTAC
TACCACATCG ACACGTTCCT GCGTTACGTG AACCAGACGC TCGGCATCAA GGCGCTGCCG
TACCAGTACA CGGGCGGCGT GCAGTACGAC CCGCACGGCG AATCGGGCGA CGACAACTCG
TCGTATTCGT CGAGCAGCGG CCGGCTGACC TTCGGGCAAG GCGGCGTCGA CGACGCGGAA
GACGCGGACG TCGTGATCCA CGAGCTCGGC CACGGCATCC ACGACTGGGT CACCAACGGC
GGCCTGTCGC AACAGGAAGG CCTGTCGGAA GGCACCGGCG ACTATCTCGC CGCCGCGTAC
AGCCGCGACT TCAACCAGTG GAGCCCGTCG GATGCGCAGT ATCAGTGGGT CTACAACTGG
GACGGTCACA ACGAGTTCTG GGGCGGCCGC GTGACCAACT GGAACGTCGG GCGCACCTAT
GCGCAGGCGC GCGGCGCGGA GATCCACACG GCCGGCCAGT ACTGGGCGTC ATGCAACCTC
GTCGCGCGCG ATGCGATCGG CGCGCAGGCG ATGGACAAGG CGTTCCTGAA GGGACTGTCG
ATGACCAACA GCTCGACCAA CCAGAAGGCG GCCGCACAGG CCGTGCTGAC GGCCGCCGCC
GCGCTCGGCT ACAGCAGCAC GCAGCTCACC GCGATCGGCA ACGCGTACAA CAAGAGCTGC
ACGTACGGCG TGACCGTTCC GCAGAAGTCG TAA
 
Protein sequence
MQTSRKALPL ALSLALGFGI VGGTLADTKV SNPQAASLRE SLTRGVAPPA AKADTAAGQF 
RADGVAVTLY NPAWRVKKAA ATPAATARDF VASQAAQLGL DAAALASLVV TSERNDADFT
VVRLQQQAAG LPVYGSDIAV TVAKDGRILY VASNTISGVV ATTRKSQAVD QQQALDRARA
YLGVSGFTHL DAQLVAFVDQ AGTHTAWKVR GRPQDGPKGD WELLIDSGSG EVLRAEDKAF
YATDGTGFVF RPDPLSPTKS SYGSTGYKDS SDADSTQLTA ARVRVTLKEL AQSGTRYTLT
GPYAACIDFD APLDKACPSQ STPAFEFTRG NLYFEAVNAY YHIDTFLRYV NQTLGIKALP
YQYTGGVQYD PHGESGDDNS SYSSSSGRLT FGQGGVDDAE DADVVIHELG HGIHDWVTNG
GLSQQEGLSE GTGDYLAAAY SRDFNQWSPS DAQYQWVYNW DGHNEFWGGR VTNWNVGRTY
AQARGAEIHT AGQYWASCNL VARDAIGAQA MDKAFLKGLS MTNSSTNQKA AAQAVLTAAA
ALGYSSTQLT AIGNAYNKSC TYGVTVPQKS