| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5052 |
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| Symbol | |
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| ID | 4452312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 2077173 |
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| End bp | 2078126 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639697109 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_838679 |
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| Protein GI | 116693146 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.244111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCGA CGAAGATCGC CGCGCTCGCC GCGGCCGTGC TGGCGACCGG CGCGTTCACG
CACGCCGCGC TGGCCGAGAC GGAGGCCACG ACCTGCCGGA CCGTGCGTTT CGCGGATATC
GGCTGGACCG ACATCACGTC GACCACGGCG CTCGCGTCGA CCGTGTTCGA GGCGCTCGGC
TACAAGCCGA CCACGACGAT CGCGTCGGTG CCGATCTCGT TCGCCGGCCT CAAGAGCAAG
CAGCTCGACG TGTCGCTCGG CTACTGGTGG CCCGTGCAGC AGAAGCAGCT GCAACCGTTC
CTCGACAGCA AGTCGATCAA CGTCGTCGAG CCGCCGAACC TGTCCGGCGC AAAGGCGACG
CTCGCGGTGC CGAGCTATGA ATACCAGGCC GGCCTGAAGA CCTTCGACGA CATCGCGAAA
CACCGCGCGG AACTCGACGG CAAGATCTAC GGGATCGAGC CGGGCAGCAG CGCGAACGCG
ACGATCCAGA AGATGATCGA CACGAACCAG TACGGGCTCG GCGGCTTCAA GCTCGTCGAA
TCGAGCGAAG CGGGGATGCT GGTGACGGTC GAGCGCGCGG TCCGCGACAA GAAGTGGGTC
GTGTTCCTCG GTTGGGAGCC GCATCCGATG AACATCCAGC TCAGCATGAA CTACCTGTCC
GGCGGCGACG CGGCGTTCGG CCCGAACTAC GGCGAAGCGC GCGTGTACAC GCTCACCGCG
CCCGACTTCA TCGCGCGCTG CCCGAACGCG GGCAAGCTCG TGACGAACCT GCGCTTCTCG
ACGCAGCTCG AGAACCAGCT GATGCAGTCG GTGATGAACA AGACCAAGCC GGCCGAGGCC
GCGAAGGCGT ACCTGAAGAA GAACCCGCAG GTGCTCGATC CGTGGCTCGC GGGCGTCAAG
ACGTTCGACG GCAAGGACGG CCTGCCTGCC GTGAAGGCGT ATCTCGGCCT GTGA
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| Protein sequence | MKSTKIAALA AAVLATGAFT HAALAETEAT TCRTVRFADI GWTDITSTTA LASTVFEALG
YKPTTTIASV PISFAGLKSK QLDVSLGYWW PVQQKQLQPF LDSKSINVVE PPNLSGAKAT
LAVPSYEYQA GLKTFDDIAK HRAELDGKIY GIEPGSSANA TIQKMIDTNQ YGLGGFKLVE
SSEAGMLVTV ERAVRDKKWV VFLGWEPHPM NIQLSMNYLS GGDAAFGPNY GEARVYTLTA
PDFIARCPNA GKLVTNLRFS TQLENQLMQS VMNKTKPAEA AKAYLKKNPQ VLDPWLAGVK
TFDGKDGLPA VKAYLGL
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