Gene Bcen2424_5050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5050 
Symbol 
ID4452310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2075126 
End bp2076091 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content68% 
IMG OID639697107 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_838677 
Protein GI116693144 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.533105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTGA AGACCGACAT CAAGACGTTT GCCGCCATCG GCACTGGCGT GATCGGCAGC 
GGATGGATTT CCCGCGCGCT CGCGCACGGT CTCGACGTGG TCGTGTGGGA CCCGGCGCCG
GGCGCCGAAG CGCGACTGCG CGCGAACGTC GCGAACGCAT GGCCCGCGCT CGAACGCGTC
GGCCTCGCGC CGGGCGCCGA TCCCGCACGG CTGCGCTTCG TATCGACGAT TGAAGCATGC
GTCGCCGATG CGGATTTCAT CCAGGAGAGC GCGCCCGAGC GCGAGGCGCT GAAGCTCGAA
CTGCACGAGC AGATCAGCCG CGCGGCGAAG CCCGACGCGA TCATCGCGTC GTCGACGTCG
GGGCTACTGC CGACCGATTT CTACGCGCGG GCCACGCATC CGGAGCGCTG CGTGGTCGGT
CACCCGTTCA ACCCCGTCTA TCTGCTGCCG CTCGTCGAGG TGCTCGGCGG CGCGCGCACG
TCGCCGGAAG CGGTCGAGGG CGCGATGGAG GTCTATCGCA AGCTCGGCAT GCGGCCGCTG
CATGTGCGCA AGGAAGTGCC GGGCTTCATC GCGGACCGCC TGCTCGAAGC GTTGTGGCGC
GAGGCGCTGC ATCTGGTCAA CGAAGGCGTC GCGACGACCG GCGAGATCGA CGATGCGATC
CGCTTCGGCG CGGGCATCCG CTGGTCGTTC ATGGGTACGT TCCTGACCTA CACGCTGGCC
GGCGGCGACG CGGGCATGCG ACACTTCATG CAGCAATTCG GCCCGGCGCT CGAACTGCCG
TGGACGAAGC TGGTCGCGCC GACGCTCACC GACGCGCTGA TCGACAGCGT CGTCGAAGGC
ACGACCGAAC AGCAGGGCAC GCGCAGCATC AAGGAGCTCG AACGCTATCG CGACGAGTGC
ATCACCGAGG TGCTGAAATC GATCGCCGCG GTGAAGGCGC GGCACGGGAT GCGATTCGAG
GACTAA
 
Protein sequence
MAVKTDIKTF AAIGTGVIGS GWISRALAHG LDVVVWDPAP GAEARLRANV ANAWPALERV 
GLAPGADPAR LRFVSTIEAC VADADFIQES APEREALKLE LHEQISRAAK PDAIIASSTS
GLLPTDFYAR ATHPERCVVG HPFNPVYLLP LVEVLGGART SPEAVEGAME VYRKLGMRPL
HVRKEVPGFI ADRLLEALWR EALHLVNEGV ATTGEIDDAI RFGAGIRWSF MGTFLTYTLA
GGDAGMRHFM QQFGPALELP WTKLVAPTLT DALIDSVVEG TTEQQGTRSI KELERYRDEC
ITEVLKSIAA VKARHGMRFE D