Gene Bcen2424_5043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5043 
Symbol 
ID4452303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2068802 
End bp2069566 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content70% 
IMG OID639697100 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_838670 
Protein GI116693137 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.699646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.368322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTGC AGGGCAAACG CGCGCTGGTG ACGGCGGCCG GGCAGGGCAT CGGCCGCGCG 
ACCGCGCTGC GGTTCGCGAG CGAGGGCGCC GACGTGCTGG CGACCGACAT CAACGAAGCC
GCGCTGGTGC GGCTCGAGGC CGACGCCGAA CGCGCGGGCG GCCGGCTGGT CACGCGGCGG
CTCGACGTCA CCGCTACGAA CGAGGTCGCG GCGCTCGCCG CGAGCGAACG CGCGTTCGAC
GTGCTGTTCA ACTGCGCGGG CTACGTGCAT CACGGCTCGA TCCTCGAGTG CGACGAAGAC
GCGTGGGCGT TCTCGCTGAA CCTGAACGTC ACGTCGATGT ACCGGCTGAT CCGCGCGCTG
CTGCCCGCGA TGCTCGAAGC CGGCGGCGGG TCGATCGTCA ACATGGCGTC GGCCGCGTCG
AGCGTGAAGG GTGTGCCGAA CCGCTTCGTG TACGGCACCA CCAAGGCGGC CGTGATCGGG
CTGACCAAGG CGGTGGCCGC CGATTTCGTC GAACGCGGCA TCCGCTGCAA CGCGATCTGC
CCGGGCACGA TCGAATCGCC GTCGCTGGAG CAGCGGATCG CCGACCAGGC GCGCACGCGC
CACGTGTCCG CCGACGAGGT GCGCCAGGCG TTCGTCGCGC GCCAGCCGAT CGGCCGTATC
GGCAGCGCGG ACGAAGTGGC CGCGCTCGCG CTGTACCTGG CGTCCGACGA AGCGTCGTTC
ACCACCGGCA CGATTCACCT GATCGACGGC GGCTGGTCAA ACTGA
 
Protein sequence
MRLQGKRALV TAAGQGIGRA TALRFASEGA DVLATDINEA ALVRLEADAE RAGGRLVTRR 
LDVTATNEVA ALAASERAFD VLFNCAGYVH HGSILECDED AWAFSLNLNV TSMYRLIRAL
LPAMLEAGGG SIVNMASAAS SVKGVPNRFV YGTTKAAVIG LTKAVAADFV ERGIRCNAIC
PGTIESPSLE QRIADQARTR HVSADEVRQA FVARQPIGRI GSADEVAALA LYLASDEASF
TTGTIHLIDG GWSN