Gene Bcen2424_5038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5038 
Symbol 
ID4452298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2063106 
End bp2064143 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content66% 
IMG OID639697095 
Productinner-membrane translocator 
Protein accessionYP_838665 
Protein GI116693132 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.893051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACG ATACGCATCC CGTTCCGCCC CTCGCCACCG GCGACACGCC GGCCGCCGCA 
TCGAGCCTGA AATCGCGCTT CTTCAACCCG GCCGCGCGGC AGAAGCTGCT CGCGTTCGCG
AGCCTCGTGC TGCTGATCGT GTTTTTCAGC TTCGCGTCGT CGAACTTCCT CGAAGTCGAC
AACCTCGTGT CGATCCTGCA GGCCACCGCC GTCAACGGCG TGCTGGCCGT CGCCTGCACG
TACGTGATCA TCACGTCCGG CATCGACCTG TCGGTCGGCA CGCTGATGAC GTTCTGCGCG
GTGATGGCCG GCGTCGTGCT GACGAAGTGG GGGATGCCGC TGCCGCTCGG GATTCTGGCC
GCGTTGTGCT TCGGCGCGCT GTCGGGCTGC GTGTCGGGCT TCGTGATCGC GAAGATGAAG
GTGCCGCCGT TCATCGCGAC GCTCGGCATG ATGATGCTGC TCAAGGGACT GTCGCTCGTG
ATCTCGGGCA CGCGGCCGAT CTACTTCAAC GACACGCCGG GCTTCACGTC GATCGCGCAG
GATTCGCTGA TCGGCAACCT CATTCCCGCG CTGCCGATTC CCAACGCGGT GCTGATCCTG
TTTCTCGTCG CGATCGGCGC GTCGATCGTG CTGAACCGGA CCATCTTCGG CCGCTACACG
TTCGCGCTCG GCAGCAACGA GGAGGCGCTG CGGCTGTCCG GCGTGAACGT CGATGCGTGG
AAGATCGCCG TCTATACGTT CAGCGGCGCG GTGTGCGGGA TCGCCGGCCT GCTGATCGCG
TCGCGGCTGA ACTCGGCGCA GCCGGCGCTC GGGCAGGGCT ACGAGCTCGA TGCGATCGCG
GCCGTCGTGA TCGGCGGCAC GTCGCTGTCG GGCGGCGCGG GCAGCATCGT CGGCACCATC
ATCGGCGCGT TCATCATGAG CGTGCTGACC AACGGCCTGC GCATCATGTC GGTCGCACAG
GAATGGCAGA CGGTCGTGAC GGGCGTGATC ATCATTCTCG CCGTCTACGT GGACATCCTG
CGCCGGCGTC GCCGCTGA
 
Protein sequence
MSNDTHPVPP LATGDTPAAA SSLKSRFFNP AARQKLLAFA SLVLLIVFFS FASSNFLEVD 
NLVSILQATA VNGVLAVACT YVIITSGIDL SVGTLMTFCA VMAGVVLTKW GMPLPLGILA
ALCFGALSGC VSGFVIAKMK VPPFIATLGM MMLLKGLSLV ISGTRPIYFN DTPGFTSIAQ
DSLIGNLIPA LPIPNAVLIL FLVAIGASIV LNRTIFGRYT FALGSNEEAL RLSGVNVDAW
KIAVYTFSGA VCGIAGLLIA SRLNSAQPAL GQGYELDAIA AVVIGGTSLS GGAGSIVGTI
IGAFIMSVLT NGLRIMSVAQ EWQTVVTGVI IILAVYVDIL RRRRR