Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5038 |
Symbol | |
ID | 4452298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2063106 |
End bp | 2064143 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639697095 |
Product | inner-membrane translocator |
Protein accession | YP_838665 |
Protein GI | 116693132 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.893051 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAACG ATACGCATCC CGTTCCGCCC CTCGCCACCG GCGACACGCC GGCCGCCGCA TCGAGCCTGA AATCGCGCTT CTTCAACCCG GCCGCGCGGC AGAAGCTGCT CGCGTTCGCG AGCCTCGTGC TGCTGATCGT GTTTTTCAGC TTCGCGTCGT CGAACTTCCT CGAAGTCGAC AACCTCGTGT CGATCCTGCA GGCCACCGCC GTCAACGGCG TGCTGGCCGT CGCCTGCACG TACGTGATCA TCACGTCCGG CATCGACCTG TCGGTCGGCA CGCTGATGAC GTTCTGCGCG GTGATGGCCG GCGTCGTGCT GACGAAGTGG GGGATGCCGC TGCCGCTCGG GATTCTGGCC GCGTTGTGCT TCGGCGCGCT GTCGGGCTGC GTGTCGGGCT TCGTGATCGC GAAGATGAAG GTGCCGCCGT TCATCGCGAC GCTCGGCATG ATGATGCTGC TCAAGGGACT GTCGCTCGTG ATCTCGGGCA CGCGGCCGAT CTACTTCAAC GACACGCCGG GCTTCACGTC GATCGCGCAG GATTCGCTGA TCGGCAACCT CATTCCCGCG CTGCCGATTC CCAACGCGGT GCTGATCCTG TTTCTCGTCG CGATCGGCGC GTCGATCGTG CTGAACCGGA CCATCTTCGG CCGCTACACG TTCGCGCTCG GCAGCAACGA GGAGGCGCTG CGGCTGTCCG GCGTGAACGT CGATGCGTGG AAGATCGCCG TCTATACGTT CAGCGGCGCG GTGTGCGGGA TCGCCGGCCT GCTGATCGCG TCGCGGCTGA ACTCGGCGCA GCCGGCGCTC GGGCAGGGCT ACGAGCTCGA TGCGATCGCG GCCGTCGTGA TCGGCGGCAC GTCGCTGTCG GGCGGCGCGG GCAGCATCGT CGGCACCATC ATCGGCGCGT TCATCATGAG CGTGCTGACC AACGGCCTGC GCATCATGTC GGTCGCACAG GAATGGCAGA CGGTCGTGAC GGGCGTGATC ATCATTCTCG CCGTCTACGT GGACATCCTG CGCCGGCGTC GCCGCTGA
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Protein sequence | MSNDTHPVPP LATGDTPAAA SSLKSRFFNP AARQKLLAFA SLVLLIVFFS FASSNFLEVD NLVSILQATA VNGVLAVACT YVIITSGIDL SVGTLMTFCA VMAGVVLTKW GMPLPLGILA ALCFGALSGC VSGFVIAKMK VPPFIATLGM MMLLKGLSLV ISGTRPIYFN DTPGFTSIAQ DSLIGNLIPA LPIPNAVLIL FLVAIGASIV LNRTIFGRYT FALGSNEEAL RLSGVNVDAW KIAVYTFSGA VCGIAGLLIA SRLNSAQPAL GQGYELDAIA AVVIGGTSLS GGAGSIVGTI IGAFIMSVLT NGLRIMSVAQ EWQTVVTGVI IILAVYVDIL RRRRR
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