Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5033 |
Symbol | |
ID | 4452241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 2057666 |
End bp | 2058907 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639697090 |
Product | D-amino-acid dehydrogenase |
Protein accession | YP_838660 |
Protein GI | 116693127 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.548496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTCG ACGTCATCGT TCTCGGCGCC GGCATCGTCG GCGTCTCCGC CGCGCTGCAC CTGCAGGATC GCGGCCGCAA GGTCGCCCTC GTCGATCGCG GCGCGCCCGG CGAAGGCACG AGCTTCGGCA ATGCCGGGCT GATCGAGCGC TCGTCGGTCG AACCGTATCC GTTCCCGCGC AGCCCGTTCA CGCTGATGCG CTATGCGCTG AACCGCTCCA CCGATCTCTA CTGGCACAGC GCGTCGCTGC CCGCGTTCGC GCCGTGGCTC GCACGGTTCT GGTGGGAATC GGCGCCGCCG CGTCATGCGG CGGCCTCGCG CGACATGCTG CCGCTGATCG AACGCTGCAT CGTCGAACAC GATGCGCTGA TCGCGCGGGC CGGCGCCGGC GAACTGGTCC GCGCCAGTGG CTGGCTGGAA GCGTTCCGCA CGCCGGCCGC ATTCGAACGC GGCGTGGCCG AGGCCGGCCT CACCGCGCGC CGCCACGGGC TCGGCATCAC GCCGCTCGAT GCGGCCGCGC TGCGCGCGCA CGAACCGAGC CTCGCACCGG GCTTCTGCGG CGCGCTGCAC TGGCTCGACC CGAAAAGCGT CGTCGACCCG GCCGCGCTCG TCAAAGCGTA TGCGCACCTG TTCGTGCAGG GCGGCGGCAC GCTGCTGACC GGCGACGCCG CGAGCCTCGA CGCGCTGTCG CCCGGCTGGC AGGTGAGGAC CGACGACGGC CCGGCGGCCG CGCCGGCCGT CGTCGTCGCG CTCGGTCCGT GGTCCGACAC GGTGTTCGGC AAGTTCGGCT ACAAGATCCC GTTGCGCGAG AAGCGCGGCT ACCACATGCA CTACGCGCCG TCCGCGCGCG GCGTGCCGTC GGCGCCGATC GTCGATCGCG AATACGGTTA TGTAATCGCG CCGATGCGGC GCGGGCTGCG GCTGACGACC GGCGTCGAGA TCGCGCGGCG CGGGCTTCCG CCAACGGGCG TGCAGCTCGA ACGCGCCGAA CGCGTCGCGC GGCCGGTGTT CGGTTTCGGC GAGCGGCTCG ATCCGCATCC GTGGCTCGGC TTCCGGCCGT GCACGCCCGA CATGCGCCCG GTGATCGGCC CCGCGCCCGC GCATCGCGGG CTGTGGTTCG CGTTCGGGCA CAACCATCAC GGGCTGACGC TCGGCCCGGT CAGCGGCCGC CTGCTGGCCG AGATGATGAC CGGCGAGGCG CCGTTCACCG ACCCGGCACC GTATCGCGCG GACCGCTTCT GA
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Protein sequence | MDFDVIVLGA GIVGVSAALH LQDRGRKVAL VDRGAPGEGT SFGNAGLIER SSVEPYPFPR SPFTLMRYAL NRSTDLYWHS ASLPAFAPWL ARFWWESAPP RHAAASRDML PLIERCIVEH DALIARAGAG ELVRASGWLE AFRTPAAFER GVAEAGLTAR RHGLGITPLD AAALRAHEPS LAPGFCGALH WLDPKSVVDP AALVKAYAHL FVQGGGTLLT GDAASLDALS PGWQVRTDDG PAAAPAVVVA LGPWSDTVFG KFGYKIPLRE KRGYHMHYAP SARGVPSAPI VDREYGYVIA PMRRGLRLTT GVEIARRGLP PTGVQLERAE RVARPVFGFG ERLDPHPWLG FRPCTPDMRP VIGPAPAHRG LWFAFGHNHH GLTLGPVSGR LLAEMMTGEA PFTDPAPYRA DRF
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