| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5027 |
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| Symbol | |
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| ID | 4452235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 2049897 |
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| End bp | 2051165 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639697084 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_838654 |
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| Protein GI | 116693121 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.750126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.244127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCG CCGTGCCTCC CATTCGCGCT TCGCGCCCGC CGCGCCCGAC GCTGCAAAGC
GTGCTGCGGC GCGCGCACCT GCGCCTCGCG TTCGTCGCGG TGACGATGGC CGCCGTGTCG
TTGATCGTCG TCGCCGTGAT CGCGTTGCGC GCGTATGCCG GCAACAACCT GAACCTGCTG
GCGCGCTCGC TCGGTTATAC GGTCGAGGCG GCGCTCGTGT TCGGCGATCG CGTCGCGGCG
AACGAGGCGA TCGGGATGAT CGCCGGCGAC GAGGACGTCG CGCAGGTGGT CGTCACCGAC
AGCAAGGGAC AACTGTTCGC CACGTGGCAG TTGCCGGCCG GAAACGGCCT CGCGCGGCTC
GAGCGCGCGG TGGCCGACGT GGCGCTGCCG GGGCCGGTGA CCGTCCCGGT GATGCACGAC
GGCATCATCG TCGGTCACGT CGTCGTGCGC GGCCGCGGCC ACCAGTTCTT CGGCTTCCTG
CTCGGCGGCG TCGGCGGCAT TCTCGGCTGC CTGGCCGTCA GCGTGTTCGG CGCGTACGTC
AGTTCGAAAC GCCTGCTGCG CGACATCGTT TCGCCGCTGC GCGCGCTGGC CGGCGTCGCG
CACGCGGTGC GGCGCGAGCG CGCGTTCGCG CGGCGCGTCG AGCCGGCGGC GATCGCGGAA
CTGAACCAGC TCGGCGACGA CTTCAACGCG CTGCTCGACG AATTCGAAGA CTGGCAGAAC
ACGCTGCGCG ACGAGAACGC GTCGCTCGAG CACAAGGCGA CGCACGATGC GCTCACGGGG
TTGCCCAACC GCGTGCAGTT CGAGTCGCGC CTCGCGCTTG CGCTTTGCGA TGCCACGTTG
ACGGGGCAGC GGGTCGCCGT CCTCTATCTC GACTGCGACC GCTTCAAGGA GATCAACGAT
GGTTTCGGTC ACGACGCCGG GGACGCGGTG TTGATCGACA TCGCATCGCG GCTGCGCACG
CGGGTGCGAG AGACCGATCT CGTCGCGCGC CTGGGCGGCG ACGAATTCGC GGTGATGCTG
GCGGCGGTGC CTGAAGCGGG CAGCGTGTGC CGGATCGCCG ACGAGATTTT GTCCGGCATG
GCACCGTCGA TCGAGCTGTC CGACGGCCGC GTGGTGGCCA CCATGATGAG TGCCGGCGTT
GCGCTGTATC CCGATCACGC GTTGGACGCG AGCGGCTTGC TGCGCGCGGC GGATATCGCG
ATGTACCGCG CCAAGCGTGC GCGGCCGGGA TCGTGGCAGT TGGCGGAGAG CGTTGCAGGG
CCGGTTTGA
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| Protein sequence | MTRAVPPIRA SRPPRPTLQS VLRRAHLRLA FVAVTMAAVS LIVVAVIALR AYAGNNLNLL
ARSLGYTVEA ALVFGDRVAA NEAIGMIAGD EDVAQVVVTD SKGQLFATWQ LPAGNGLARL
ERAVADVALP GPVTVPVMHD GIIVGHVVVR GRGHQFFGFL LGGVGGILGC LAVSVFGAYV
SSKRLLRDIV SPLRALAGVA HAVRRERAFA RRVEPAAIAE LNQLGDDFNA LLDEFEDWQN
TLRDENASLE HKATHDALTG LPNRVQFESR LALALCDATL TGQRVAVLYL DCDRFKEIND
GFGHDAGDAV LIDIASRLRT RVRETDLVAR LGGDEFAVML AAVPEAGSVC RIADEILSGM
APSIELSDGR VVATMMSAGV ALYPDHALDA SGLLRAADIA MYRAKRARPG SWQLAESVAG
PV
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