Gene Bcen2424_5026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5026 
Symbol 
ID4452234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2049298 
End bp2049810 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content66% 
IMG OID639697083 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_838653 
Protein GI116693120 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.11353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0977146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACT CGTTTCCTGT GAGCACGGGG CGGACGTGCG TCGGGAGCGC GCTGCTGCTG 
TGCATGCTGC TGGTGGGCTG CCAGACGCCG CCGCCGCTTC ATCGGGGGCT GACGCAGACG
CAGGTGACGG CGCTGAAGTC GGCCGGGTTC CAGGAGACTG GACAGGGATT CGAATTCGGG
TCGACCGGGC CGATCCTGTT CGATTTCGAC CGGTACAACC TCAAGCCGGA TGTGCGCCGG
ATCGTGGAAC GGATCGGGCG GACCTTGCGG TCGGCGGGGA TCAACGGAGT GCGCGTGTAC
GGGTACTCGG ATGACGAGGG GACGGCTGCT TACGACGCCG AGTTGTCGAG GCGGCGAGCG
GAAGTCGTTG CGGTCGAGCT GGTTGACGTC GGGCTGGATG CGAAGCGGAT TGCGATCGTC
GGAAAAGGGA AGCTCGACCC GGTCGGGGAT AACAGGACGC CGGCAGGGCG GGCGCAGAAT
CGGCGGGCGG CGATCGTGGT TTCGCCGCGA TGA
 
Protein sequence
MNHSFPVSTG RTCVGSALLL CMLLVGCQTP PPLHRGLTQT QVTALKSAGF QETGQGFEFG 
STGPILFDFD RYNLKPDVRR IVERIGRTLR SAGINGVRVY GYSDDEGTAA YDAELSRRRA
EVVAVELVDV GLDAKRIAIV GKGKLDPVGD NRTPAGRAQN RRAAIVVSPR