| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5025 |
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| Symbol | |
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| ID | 4452233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 2046773 |
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| End bp | 2048893 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639697082 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_838652 |
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| Protein GI | 116693119 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.118599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTCG CTCCGAATGG GGGTATTCCC AGTGGATTGG GTGGTGGTGC GTTCGGCTCG
TTGAGTGCGC TCGGCGGCCT CGCCGGCCCG GTGGCGTCGA GTGTGGCCGG CAGCCTCGGG
CCGCTCGCGG GGCTGGCCGG GCACGTCGAC ACCGTCCAGC GCGCGCTGCA GCTCGCACAG
ACCGGTTTCT CGCTGATGGA GAAGACGCCC GGCGCCATCG CCGACGCGAT CAACGGCGCC
GCCAACCCCG CGCGCCTGAC CCAGCTCAAT CGTTACGTCA CGCTCGATAC GCCGCTCGGC
CCGGATGTGC TGCTGGTCAG CGCGGCCGTC GTCGACGAGC ACGTGAACCG CTTGCCGGAA
ATCCATCTCG ACCTGCTGTC GCATCGCCAC GACCTGCGCC CGGAGGACCT GATCGGCCAG
CAGGTCAAGA TCCGCTTCGA CCAGCAGGCG CGCCTGTCGA CGCTCGAACG CGTCGTGGCG
GCGGGCGGCG GCGACAACGA CCGCTACTTC GACGGCTACG TCGCGTCGTT CGATCGCGCC
GGCAACCCCG GCAACGTCAC GCAATACCAC CTGACGGCCG TGCCGTGGTT CTGGTTCCTG
ACGCGCTCGA CCGACTGCCG GATCTTCCAG AACAAGACCG CGCAGGACAT CCTCACCGAG
ATCTTCCAGG AACACGGGTT TTCCGATTTC ACGTTCGACA TCCGGACCAG CCAGAAGCCG
CTCGAGTACG TCGTGATGTA CCAGGAGAGC TACTACAACT TCTGCGCGCG GCTGATGGAG
CAGGAAGGGC TCATCTGGAC GCACCGCTAC GAGAAGGACA AGCACTTTCT CGTGATCGGC
GACACGAACC TGCTGTTCCG CCCGATCGAC GGGCTCGCCA CCGTGCCGTT CGCCGCGACC
GAGGCCAGCG AAGACAGCGG CATCGACCAG TTGCACGAAG GCCGGCGCTT CGGCGTCGGC
AAGGTCACGT TCCGCGACTT CAATCACCAG AATCCGTCGT CGCCGCTGAT GCTGGTGGAG
GCCGGCCCGC AAAACCTCAA GCATGCGCGG CTCGACGCGA CCGAGCGGTT CGAGCACCAG
TCGCTGTACG ACCACGGCGA CGACGGCAAC CGCTACGCCC GTTTCGCGAT GGAGGCCGAG
GAGGCGCAAG CCCATCGCTA TACCGGCGGC GGCTACGCGT GGCGCATGAC CACGGCGGGC
GCCGTGACCG TCGCGAATCA TCCCGTCCTC GAAAACAACC AGGAGTACGT GATCCTGCAC
GTGCGTCACG AGGCCGTGAA CGACTATACG CAGCACAGCG CGAAGCTGCC GTACCGGAAC
AGCTTCTCGC TGTTGCCGAA GAAGATTCCG TACCGTGCGC CGCGCGCGAC GCCGAAGCCG
GTGATTCACG GCACGCAGTC GGCGATCGTC GTCGGGCCGA AGGGCGAGGA AATTCATACG
AACGGCAGCG CGGTGAAAGT GCATTTCCCG TGGGATCGGC GCGGCAAGAA GGACGGCTCC
GATTCGATGT GGGTGCGCGT GTCGCAGCCG TGGGCGGGCG ACGGCTGGGG CGCGGCCGCG
ATTCCGCGGA TCAAGCAGGA AGTACTGGTG GCGTTCAATC AGGGCGATCC GGATAACCCC
GTGATCGTCG GCCGCGTGTT CAACGGCGAG CAGGGCAACC CGTATCACGG CGCGGCCGGC
CAGACGATGG GGATCAAGAG CCAGACGCAC AAGGGGCAGG GGTCGAACGA GTTGCTGATG
AGCGACGTCA ATGGTGCGCA GATGCTCTAC ATGCATGCGC AGAAGGACAT GCATACCGTG
GTCGAGGACG CTCAGTGGAC TCAGGTTCTC AAAGGCGACC GGACCGTCGA GGTGGGCAAG
GGCAACCATA CGACGGCCAT CGCGGTTGGC AACCTGTCGG ACGTTGTCGT GCAGGGCAAT
ACGCTGCATC AGACTCCGCA GGGTGTGCAC ACGCTGGAAG CCAAGGAACT CTGGATCAAG
ATCGGCGGCG ACGGCGGCAC GCGGATCCAC ATGACAGCCG ACTCGATCGA CATCTACAAG
GGCGAGTCGG TGATCCATCT GGATGACGGC AATATCAATA TCCAGGCTGC TCGAACCGAC
ATCAACCCGA AGAACGGCTA A
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| Protein sequence | MSFAPNGGIP SGLGGGAFGS LSALGGLAGP VASSVAGSLG PLAGLAGHVD TVQRALQLAQ
TGFSLMEKTP GAIADAINGA ANPARLTQLN RYVTLDTPLG PDVLLVSAAV VDEHVNRLPE
IHLDLLSHRH DLRPEDLIGQ QVKIRFDQQA RLSTLERVVA AGGGDNDRYF DGYVASFDRA
GNPGNVTQYH LTAVPWFWFL TRSTDCRIFQ NKTAQDILTE IFQEHGFSDF TFDIRTSQKP
LEYVVMYQES YYNFCARLME QEGLIWTHRY EKDKHFLVIG DTNLLFRPID GLATVPFAAT
EASEDSGIDQ LHEGRRFGVG KVTFRDFNHQ NPSSPLMLVE AGPQNLKHAR LDATERFEHQ
SLYDHGDDGN RYARFAMEAE EAQAHRYTGG GYAWRMTTAG AVTVANHPVL ENNQEYVILH
VRHEAVNDYT QHSAKLPYRN SFSLLPKKIP YRAPRATPKP VIHGTQSAIV VGPKGEEIHT
NGSAVKVHFP WDRRGKKDGS DSMWVRVSQP WAGDGWGAAA IPRIKQEVLV AFNQGDPDNP
VIVGRVFNGE QGNPYHGAAG QTMGIKSQTH KGQGSNELLM SDVNGAQMLY MHAQKDMHTV
VEDAQWTQVL KGDRTVEVGK GNHTTAIAVG NLSDVVVQGN TLHQTPQGVH TLEAKELWIK
IGGDGGTRIH MTADSIDIYK GESVIHLDDG NINIQAARTD INPKNG
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