Gene Bcen2424_5019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5019 
Symbol 
ID4452227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2037685 
End bp2038803 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content65% 
IMG OID639697076 
Productextracellular ligand-binding receptor 
Protein accessionYP_838646 
Protein GI116693113 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.560718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGT CCCGTCTTAC GTCCATTTCC GTCGCCGCCG TGCTGTTCGC CGCCGGCGCC 
GCCGCCGCGC AAGCGGAAAC CGTGAAGATC GCCATCGCTG GTCCGATGAG CGGCTCGGTC
GCCCAGTACG GCGACATGGT GAAGGCCGGC GCGCTGACCG CGATCGAACA GATCAACGCG
GCCGGCGGTG CGGGCGGCAA CAAGTTTGAA GTCGTGATGA TGGACGACGC GTGCGAACCG
AAGCAGGCCG TCGCCGTCGC CAACAAGATC GTCAGCCAGA AGATCAAGTA CGTGATCGGC
CACGTGTGCT CGGGCTCGAC GATTCCCGCG TCGGACATCT ACGAGAACGA AGGCATCGTG
ATGGTCACGC CGTCGGCCAC CGCGCCGCAG CTGACGGAAG GCAAGAAGCG CCACTTCATC
TTCCGCACGA TCGGCCGTGA CGACCAGCAA GGCCCGGCCG CCGCGCACTA CATCATCAAC
AACGTGAAGC CGAAGAAGGT CGCGGTCCTG CACGACAAGC AGTCGTACGG CCAGGGCATC
GCGTCGTCGG TGAAGAAGGA CCTCGAAGCG GCGAAGATCC CGGTCGTGCT GTTCGAAGGC
ATCAATGCCG GCGATTCGGA CTACTCGGCG ATCATCACGA AGCTGAAGTC GCAAGGCGTC
GATTTCGTCT ACTTCGGCGG CTACCACCCG GAAATGGGCC TGCTGATGCG CCAGGCGCGC
GAGCAGGGCG TGAAGGCGAC CTTCATGGGG CCTGAAGGCG TGGGCAACAA GGACGTGACG
GCGATCGCCG GCCCGGCTTC GGAAGGCATG CTGGTCACGC TGCCGGCCGA CTTCTCGGCC
GATCCGGCCA ACGCGGCGCT CGTGAAGGCG TTCGCGGACA AGAAGCGCGA CCCGAACGGC
CCGTTCCAGA TGCCGGCGTA CGCCGCGGTG AAGATCATCG CCGACTCGAT CGCGGGAGCG
AAGACGACCG ACCCGACGAA GGTCGCCGCG TACATGCACA AGACGACGTT CGACACGCCG
ATCGGCAAGG TCGCGTATGA CGCACAGGGC GACCTGAAGG CGTTCAAGTT CGTCGTGTAC
ACGTGGCACA AGGACGCGAC GAAGACCGCC GCCAAGTAA
 
Protein sequence
MTLSRLTSIS VAAVLFAAGA AAAQAETVKI AIAGPMSGSV AQYGDMVKAG ALTAIEQINA 
AGGAGGNKFE VVMMDDACEP KQAVAVANKI VSQKIKYVIG HVCSGSTIPA SDIYENEGIV
MVTPSATAPQ LTEGKKRHFI FRTIGRDDQQ GPAAAHYIIN NVKPKKVAVL HDKQSYGQGI
ASSVKKDLEA AKIPVVLFEG INAGDSDYSA IITKLKSQGV DFVYFGGYHP EMGLLMRQAR
EQGVKATFMG PEGVGNKDVT AIAGPASEGM LVTLPADFSA DPANAALVKA FADKKRDPNG
PFQMPAYAAV KIIADSIAGA KTTDPTKVAA YMHKTTFDTP IGKVAYDAQG DLKAFKFVVY
TWHKDATKTA AK