Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5019 |
Symbol | |
ID | 4452227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2037685 |
End bp | 2038803 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639697076 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_838646 |
Protein GI | 116693113 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.560718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGT CCCGTCTTAC GTCCATTTCC GTCGCCGCCG TGCTGTTCGC CGCCGGCGCC GCCGCCGCGC AAGCGGAAAC CGTGAAGATC GCCATCGCTG GTCCGATGAG CGGCTCGGTC GCCCAGTACG GCGACATGGT GAAGGCCGGC GCGCTGACCG CGATCGAACA GATCAACGCG GCCGGCGGTG CGGGCGGCAA CAAGTTTGAA GTCGTGATGA TGGACGACGC GTGCGAACCG AAGCAGGCCG TCGCCGTCGC CAACAAGATC GTCAGCCAGA AGATCAAGTA CGTGATCGGC CACGTGTGCT CGGGCTCGAC GATTCCCGCG TCGGACATCT ACGAGAACGA AGGCATCGTG ATGGTCACGC CGTCGGCCAC CGCGCCGCAG CTGACGGAAG GCAAGAAGCG CCACTTCATC TTCCGCACGA TCGGCCGTGA CGACCAGCAA GGCCCGGCCG CCGCGCACTA CATCATCAAC AACGTGAAGC CGAAGAAGGT CGCGGTCCTG CACGACAAGC AGTCGTACGG CCAGGGCATC GCGTCGTCGG TGAAGAAGGA CCTCGAAGCG GCGAAGATCC CGGTCGTGCT GTTCGAAGGC ATCAATGCCG GCGATTCGGA CTACTCGGCG ATCATCACGA AGCTGAAGTC GCAAGGCGTC GATTTCGTCT ACTTCGGCGG CTACCACCCG GAAATGGGCC TGCTGATGCG CCAGGCGCGC GAGCAGGGCG TGAAGGCGAC CTTCATGGGG CCTGAAGGCG TGGGCAACAA GGACGTGACG GCGATCGCCG GCCCGGCTTC GGAAGGCATG CTGGTCACGC TGCCGGCCGA CTTCTCGGCC GATCCGGCCA ACGCGGCGCT CGTGAAGGCG TTCGCGGACA AGAAGCGCGA CCCGAACGGC CCGTTCCAGA TGCCGGCGTA CGCCGCGGTG AAGATCATCG CCGACTCGAT CGCGGGAGCG AAGACGACCG ACCCGACGAA GGTCGCCGCG TACATGCACA AGACGACGTT CGACACGCCG ATCGGCAAGG TCGCGTATGA CGCACAGGGC GACCTGAAGG CGTTCAAGTT CGTCGTGTAC ACGTGGCACA AGGACGCGAC GAAGACCGCC GCCAAGTAA
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Protein sequence | MTLSRLTSIS VAAVLFAAGA AAAQAETVKI AIAGPMSGSV AQYGDMVKAG ALTAIEQINA AGGAGGNKFE VVMMDDACEP KQAVAVANKI VSQKIKYVIG HVCSGSTIPA SDIYENEGIV MVTPSATAPQ LTEGKKRHFI FRTIGRDDQQ GPAAAHYIIN NVKPKKVAVL HDKQSYGQGI ASSVKKDLEA AKIPVVLFEG INAGDSDYSA IITKLKSQGV DFVYFGGYHP EMGLLMRQAR EQGVKATFMG PEGVGNKDVT AIAGPASEGM LVTLPADFSA DPANAALVKA FADKKRDPNG PFQMPAYAAV KIIADSIAGA KTTDPTKVAA YMHKTTFDTP IGKVAYDAQG DLKAFKFVVY TWHKDATKTA AK
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