| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5017 |
|---|
| Symbol | livM |
|---|
| ID | 4451863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 2035292 |
|---|
| End bp | 2036563 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639697074 |
|---|
| Product | leucine/isoleucine/valine transporter permease subunit |
|---|
| Protein accession | YP_838644 |
|---|
| Protein GI | 116693111 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.56553 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAG TCATTTCCGT TCGCCGCCCG GCCGCCGACG CGTCGTTCGG CCAGGCGCTG
AAGAACGCCG TGGCCGCCGC GATCCTGACG GCGATCCTCA CGATTCCGGT GCTCGGGCTG
CAACTGAAGC TCGATGGTTA CCAGGTCGTG CTGACGCCGC ATTGGCGCCC GGTGTGGATC
GCGGTCGCGG CCGTGTTCCT GTTCCAGTTG TTCAAGCCGT GGCTGATGCG CGCGAAAGCG
GCCGTGAAGC TGCCGGCGGC GCCGACGATG GGCGCGCAGC AACAGCGCGT GATCATCTGG
GTGCTGCTCG CCGTTGGCCT CGTATGGCCG TTCTTCGGCT CGCGCGGCGC GGTGGACGTC
GCGACGCTCG CGCTGATCTA CGTGATCCTC GGCCTCGGGC TGAACATCGT GGTCGGTTTC
GCGGGGCTGC TGGATCTCGG CTACGTCGGG TTCTACGCGG TCGGCGGCTA TACGTACGCG
ATGCTGAACC AGTATTTCGG GTTGTCGTTC TGGGAGTGCT TGCCGATCGC GGCGATCGCC
GCGGCGACGT TCGGCTTCCT GCTCGGCTTC CCGGTGCTGC GCCTGCGCGG CGACTATCTG
GCGATCGTCA CGCTCGGCTT CGGCGAAATC ATCCGCCTGC TCGCGAACAA CCTGACGAGC
CTCACCGGCG GCCCGGACGG CATCTCGAGC ATTCCGAAGC CGACGGTGTT CGGCTTCGAG
ATGGCGCGCT CGGCGAGCGT CGAAGGCGCG AAGACCTTCC ATGAACTGAT CGGGCTGGAA
TACAGCGGCG AGCACATGGT GATCTTCCTG TACCTGATCG CGCTGCTGCT GGTGGGCTTC
ACGCTGTTCG TGACGAGTCG CCTGATCCGC ATGCCGATGG GGCGCGCATG GGAAGCGCTG
CGCGACGACG AGATCGCATG CCGTTCGCTC GGCCTGAACC CGACGCGCAT CAAGCTGTCG
GCGTTCACGC TCGGCGCGGC GTTCGCGGGC ATCGGCGGCG CGTTCTTCGC GGCGCGTCAG
GGCCTCGTGA ATCCTGAATC GTTCACCTTC ATCGAATCGG CGCTGATCCT CGCGATCGTC
GTGCTCGGCG GGATGGGCTC GCAGCTCGGC GTGATTCTCG CGGCGATCCT GCTGACCGTG
CTGCCGGAGG TCGCGCGCGG GTTCGCCGAA TACCGGATGC TGATCTTCGG TCTGGTGATG
GTGTTGATGA TGATGTGGCG TCCGCAGGGC CTGCTGCCCG CGAGCCGTCC CCACGTGGAG
CTGCCGCAAT GA
|
|---|
| Protein sequence | MSQVISVRRP AADASFGQAL KNAVAAAILT AILTIPVLGL QLKLDGYQVV LTPHWRPVWI
AVAAVFLFQL FKPWLMRAKA AVKLPAAPTM GAQQQRVIIW VLLAVGLVWP FFGSRGAVDV
ATLALIYVIL GLGLNIVVGF AGLLDLGYVG FYAVGGYTYA MLNQYFGLSF WECLPIAAIA
AATFGFLLGF PVLRLRGDYL AIVTLGFGEI IRLLANNLTS LTGGPDGISS IPKPTVFGFE
MARSASVEGA KTFHELIGLE YSGEHMVIFL YLIALLLVGF TLFVTSRLIR MPMGRAWEAL
RDDEIACRSL GLNPTRIKLS AFTLGAAFAG IGGAFFAARQ GLVNPESFTF IESALILAIV
VLGGMGSQLG VILAAILLTV LPEVARGFAE YRMLIFGLVM VLMMMWRPQG LLPASRPHVE
LPQ
|
|---|
| |