Gene Bcen2424_5015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5015 
Symbol 
ID4451861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2033821 
End bp2034522 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID639697072 
ProductABC transporter related 
Protein accessionYP_838642 
Protein GI116693109 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.828723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGC TGGAACAGGT CCATACGCAC TACGGCGCGG TCGAAGCGCT CGCGGGCGTG 
TCGATCGAGG TGAACAAGGG CGAGATCGTC ACGCTGATCG GCAGCAACGG CGCCGGCAAG
ACGACGCTGA TGATGACCGT GTGCGGCACG CCGCGCGCGT CGTCGGGCCG CGTGCTGTTC
GAGGGCAACG ACATCACCGC GATGTCGACG CACCAGATCA TGCGGCAGGG AATGGCGATC
TCGCCGGAAG GGCGGCGCGT GTTCCCGAGC CTGACGGTGC TCGAGAACCT GAAGATGGGC
GGCTTCTTCG CGAGCCGTCA CGAGATCGAC GACGGCATCG AGCACGTGTT CAAGCTGTTT
CCGCGCTTGA AGGAGCGCGC GACGCAGCGG GCCGGCACGA TGTCGGGCGG CGAGCAGCAG
ATGCTGGCGA TCGGCCGTGC GCTGATGAGC AAGCCGCGTT TGCTGCTGCT CGACGAACCG
ACGCTCGGCC TCGCGCCGCT CGTGATCGCG CAGATCTTCG ACATCATCCG CACGATCCGC
GACGAAGGCG TCACGGTGTT CCTCGTCGAG CAGAACGCGA ACAAGGCGCT CGGCGTGGCC
GATCGCGGCT ACGTGCTCGA AACGGGGCGC GTGGTGCTGG CCGACACGGG CGCGAACCTG
CTCGCGAACG ACCGCATCAA GCAGGCGTAT CTCGGCGGTT GA
 
Protein sequence
MLKLEQVHTH YGAVEALAGV SIEVNKGEIV TLIGSNGAGK TTLMMTVCGT PRASSGRVLF 
EGNDITAMST HQIMRQGMAI SPEGRRVFPS LTVLENLKMG GFFASRHEID DGIEHVFKLF
PRLKERATQR AGTMSGGEQQ MLAIGRALMS KPRLLLLDEP TLGLAPLVIA QIFDIIRTIR
DEGVTVFLVE QNANKALGVA DRGYVLETGR VVLADTGANL LANDRIKQAY LGG