Gene Bcen2424_5008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5008 
Symbol 
ID4451854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2028054 
End bp2028911 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content71% 
IMG OID639697065 
ProductAraC family transcriptional regulator 
Protein accessionYP_838635 
Protein GI116693102 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.896385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG ACGCCAAGGC CGTGGGCACG ACCGACCACT GGCTCGTCGC GCGCCGCGAC 
GCGGAAACCG GCATCGAGAG CCTGCACGCG CATTTCAACG GCCATGCGTA CGATGCGCAC
GATCACGACG ACATGCTGGT CGGCTTCACC GAACAGGGCG TGCAGCGCTT TCAGTGCCAC
CGCTCGCTGC ATACCAGCGT GCCGGGCCGC GCGATCCTGA TCGAGCCGGG CGCGATGCAC
GACGGCCACG CGCCTGAGGC GGGAGGCTTC ACGTACGGGA TGCTGTACCT GCCGCAAGCG
TGGGTCGAGC GCGCCGCGCG CCGGCTCGAC CTGCCGGGCC TCGGCAGCGT CGAAGCCACG
TTCGGCCATA CGCTCGTCGA CGATCGCGGC CTCGTCGACG CGATCCGGAA CGCGTTCTTC
GCGATCCACG ACAACGAAGG CCGGCTCGCG CGCGACCAGA CGCTCGACCG CCTGCTGATA
CGGCTCGGCA GTCAACTGGG CGGCCCGCTC GCACTGGAAA GCGGCGTCGT GCCGCCCGCG
ATCGCGCGCG TACGCGACCT GCTGCACGCA CACATGGACG GCAACCTCGG CCTCGACGAA
CTCGCGAGCG TCGCCGGCAT CGACCGGTTC CGGCTGACGC GGATGTTCCA GCGTGCGTTC
GGCACGTCGC CGCACGCATA CCTCGTGCGC TTGCGGCTGC GCGCCGCGCG CAAGCTGCTG
GCTGCCGGCC GCACGCCCGC ACAGGCGGCC GCCGACGTCG GCTTCGCGGA CCAGAGCCAC
CTCGGCCGCT GGTTTCGCCG CGCGTACCGG ATCACGCCGG CCGCGTACCG GCAACTCTGC
ACAAACGTTC CAGACTGA
 
Protein sequence
MTTDAKAVGT TDHWLVARRD AETGIESLHA HFNGHAYDAH DHDDMLVGFT EQGVQRFQCH 
RSLHTSVPGR AILIEPGAMH DGHAPEAGGF TYGMLYLPQA WVERAARRLD LPGLGSVEAT
FGHTLVDDRG LVDAIRNAFF AIHDNEGRLA RDQTLDRLLI RLGSQLGGPL ALESGVVPPA
IARVRDLLHA HMDGNLGLDE LASVAGIDRF RLTRMFQRAF GTSPHAYLVR LRLRAARKLL
AAGRTPAQAA ADVGFADQSH LGRWFRRAYR ITPAAYRQLC TNVPD