Gene Bcen2424_4986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4986 
Symbol 
ID4452892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1994079 
End bp1994708 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID639697042 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_838613 
Protein GI116693080 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0538724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATTC AGACCTGGAT GCTGTTTGCC GCAGCCTATC TCGCCACGAC GCTGTCGCCG 
GGGCCCAACG TGCTGCTCGT GATCCGCAAC ACGGTGCGCT ACGGCGCGCA CGGCACCGCC
GCGACGATCG CCGGCAACCT CGTCGCGCAG GGCGTGGTCG TGCTGCTGGT CGCGCTCGGC
GTGGGCGCGG TGCTGGCCGC GATGCCGCCG CTGTTCGTCG CGATGAAGGT GATCGGCGCC
GCGTATCTGA TCTTTCTGGG TGTGCGGCAG TTACGCGGCG AGCGCAAGAC CGCCGCATCG
AGCGGCGCCG CGGAGATCGC CGTGCCCGAT CGACGGAAGC TGTTTCGTGA AGCGCTGTTC
GTGTCGGGCA GCAATCCGAA GACGATGATC TTCCTGTCCG CTTTCATGCC GCAGTTCATC
GTGCACGACC GCCCGCTGGC GCTGCAGTTC GTCGTGATGT ACGCGACGAT CGCCTGCACG
GTCGTGGTCG TTCACAGCGT CTATTCGGCC GGCGTGCGCC GCCTGCATCG CGGCTTCGGC
ATGAGCCGCG CGGTGCGCGC GCTCAAGCGT GCGAGCGGAC TGCTGTTCGT CGGGCTCGGC
ATCAAGCTGC TGACCGCGCG GCAGGCATGA
 
Protein sequence
MSIQTWMLFA AAYLATTLSP GPNVLLVIRN TVRYGAHGTA ATIAGNLVAQ GVVVLLVALG 
VGAVLAAMPP LFVAMKVIGA AYLIFLGVRQ LRGERKTAAS SGAAEIAVPD RRKLFREALF
VSGSNPKTMI FLSAFMPQFI VHDRPLALQF VVMYATIACT VVVVHSVYSA GVRRLHRGFG
MSRAVRALKR ASGLLFVGLG IKLLTARQA