| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4979 |
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| Symbol | |
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| ID | 4452885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 1989267 |
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| End bp | 1991180 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639697035 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_838606 |
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| Protein GI | 116693073 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.219279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAC CCTACGTGCT GCCCGCCACC ACGGGTCGCA CCGACCTGCT CGCGCAGGCG
CATGCGCGTT CGACCGCGGT CGGCCTGCGC GCGCACGAAC GCCCCGATTT CTCGCCGCTG
TCGCGCATCG CGCTGCGCGA ACTGCTCGAC ACGAACCACA CGCTGTTCTC GCACGCCCGC
CCGGTGATGG AGGACCTCCA CGCGCAGATC GCCGAAACGC AAAGCCTCGT GCTGCTGACG
GACGCCGACG GCGTGATCCT GCACAGCATC GGCGACGCGG ACTTCATCGA GAAAGCCAAC
CGCGTCGCGC TGTGCAACGG CGTGTCGTGG GCCGAGGGCG CACGCGGCAC CAACGCGATC
GGCACCGCGC TCGCGTCGGG TCAGGCCGTG GTCGTGCACG GTGCCGAACA TTTCCTGCGC
GCGAACCACA TCCTCACCTG CGCGTGCGCG CCGATCGTCG ATCCGTTCGG CCGCACGCTC
GGCACGCTCG ACGTGAGCGG CGACCCGCGC GGCGCCAGCC CGCATACGCT CGCGCTCGTG
CGGATGTCGG CGCAACTGAT CGAGAACCAC CTGTTCGCGA ACCAGTGCGG CGAAGCGCTG
CGGTTGCGCT TTCACGCCCA CGAGGATTGC GTCGATTCGC TGTTCGCCGG GCTCGTCGCG
TTCGGCCCCG ACGGCGGCCT GATCGCCGCG AACCGCAGCG CCCAATTCCA GCTCGGCGCA
TCGTTCGATG CACTGCAGCA TCAGGCCAGC GACGCGTTGT TCGGCATGCG CTTCGGCCAG
CTCGCGCAGC AGGCCGCGCG CGCGCCGGGC GCCACGTTCC GCCTCACGCT GTCGACCGGC
GTGCGCGTGC TCGCGCGCTG CGAATTTCCG GAAGCGCAGA AAACGACCGT CGCCGTCACG
CCGCCGGCAC CGGCCGCACG CGTGCGTGCG CCGGACCCCG ATGCGATCAC GTTCGCGACG
CTCGACACCG GCGACGCGCG CATGGCCGCC GTGCTCGAAC GCGTCGCGAA GATTCGCGGG
CGCGACCTGC CGCTGCTGAT CCTCGGGCAG ACCGGCACCG GCAAGGAATG GCTCGCCCGC
GCGCTGCACC AGGCGTCGCC GCGCGCGGAC GGCCCGTTCG TCGCGGTCAA CTGCGCGGCG
CTGCCCGATT CGCTGATCGA GGCCGAGCTG TTCGGCTATG AAGACGGCGC GTTCACGGGC
GCACGCAAGC GCGGCAGCCC CGGCAAGATC GCGCAGGCCG ACGGCGGCAC GCTGTTTCTC
GATGAAATCG GCGACATGCC GCTCGCGCAG CAGGTGCGGC TGATGCGCGT GCTGCAGGAG
CGCGCGGTAA TGCCGCTCGG CGGCGCACGC GCGGTGCCGG TCGACGTGCG GGTGGTCTGT
GCGACCCACC GCGACCTGCG CGCGATGATC GCGGAGGGCA CGTTCCGCGA GGATCTGTTC
TACCGGATCA ACGGGCTCGC GGTCACGCTG CCGGCGCTTG CCGCGCGCAC CGACCTGCCG
GCCCTCGTCG AGCGCATCCT TGCGCGGCTC GCGCGCAGCG AGCCGATGCC GCGCCGTCTG
GCGGCCGACG TGCTCGATGC GTTCGCGCGC CACCGCTGGC CCGGCAACCT GCGGCAGATG
ACCAACGTGC TGCGCACGGC CGGCATGCTC GCCGAAGACG AAGCCGAAAT CACGCTCGCG
CATTTGCCCG ACGATTTCTG GCTCGACTGC GACGATGCGC CGGCTACGCC GACGGGCGAC
ACGCCAGCCG TATCGCCCGC GTCGCCTGGC AGGCGCGAAG GCACGACGCT GCAAAGCCAT
CAGGCCGCGA TGATCGACGC GGTGCTCGCG CGGCACGGCG GCAACGTATC GGCGGCCGCG
CGCGAGCTCG GCCTCGCCCG CAATACCGTG TACCGGTATC TGCGGCGGCA CTGA
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| Protein sequence | MPQPYVLPAT TGRTDLLAQA HARSTAVGLR AHERPDFSPL SRIALRELLD TNHTLFSHAR
PVMEDLHAQI AETQSLVLLT DADGVILHSI GDADFIEKAN RVALCNGVSW AEGARGTNAI
GTALASGQAV VVHGAEHFLR ANHILTCACA PIVDPFGRTL GTLDVSGDPR GASPHTLALV
RMSAQLIENH LFANQCGEAL RLRFHAHEDC VDSLFAGLVA FGPDGGLIAA NRSAQFQLGA
SFDALQHQAS DALFGMRFGQ LAQQAARAPG ATFRLTLSTG VRVLARCEFP EAQKTTVAVT
PPAPAARVRA PDPDAITFAT LDTGDARMAA VLERVAKIRG RDLPLLILGQ TGTGKEWLAR
ALHQASPRAD GPFVAVNCAA LPDSLIEAEL FGYEDGAFTG ARKRGSPGKI AQADGGTLFL
DEIGDMPLAQ QVRLMRVLQE RAVMPLGGAR AVPVDVRVVC ATHRDLRAMI AEGTFREDLF
YRINGLAVTL PALAARTDLP ALVERILARL ARSEPMPRRL AADVLDAFAR HRWPGNLRQM
TNVLRTAGML AEDEAEITLA HLPDDFWLDC DDAPATPTGD TPAVSPASPG RREGTTLQSH
QAAMIDAVLA RHGGNVSAAA RELGLARNTV YRYLRRH
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