| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4969 |
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| Symbol | |
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| ID | 4452788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 1979761 |
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| End bp | 1981548 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639697025 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_838596 |
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| Protein GI | 116693063 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.300188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.358584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCTC TTTCCGACGA AGCGCCGCTG GCCCTGTTCG AATCGGTTCA CAGCGAAACG
GCGGTCGCCT CCGGCGACCT GACGCTCGCG GTCCGGACCT GGGGCGACCC GGCCCGCTCG
CCGGTCGTGC TGGTACACGG TTATCCCGAC GACAGCAGCG TCTGGCAGCA CGTCGCGCCG
CTGCTCGCGC GCCGGCACTA CGTGATCGCG TACGACGTAC GCGGCGCGGG CTTGTCGGGC
GTGCCGACGC GCACGGCCGA CTACCATCTC GCGAAGCTGA CCGACGATTT CGTCGCGGTG
ATCGATGCGC TCTGCCCCGG CCGCGCCGTG CATCTGGTCG CGCACGACTG GGGCTCGATC
CAGGGCTGGG AATTCGTCAC CGATCCGCGC CTGGCCGGCC GCATCGCGTC GTACACGTCG
TGCTCGGGGC CGTGCCTCGA CCACGTCGGC TTCTGGCTGC GCGAACGCGT GCTGCACCCG
ACGCCCGCGT CGCTGGCGAA GCTCGGCGGC CAGCTCGTGC GTTCGTGGTA CGTCTATCTG
TTCCACCTGC CGTTCATCCC CGAGCTCGGC TGGCGGCTGT GGCTCGGCCG CGCGTGGCCG
AGCCTGTTGC GCCGGCTCGA GAAAACGCCC GCCGCGCCAC GCCCGACCCA GGCCGACGAC
GGCGCGCACG GCGTACGGCT CTATCGCGCG AACTTCATCC GCTGCCTGTT CGCGCCGCGC
GAACGCTACG CGCACGCACC GGTGCAGACG ATCGTGCCGC TCGGCGACAA ATACGTGAGC
CCCGCGCTGT CCGAGAACCT GTCGCGCTGG GTGCCGCAGT ACTACCGCCG CGAAGTCGCG
GCCGGCCACT GGCTGCCGCT CGCCGATCCC GCGCGCTTCG CGGCGCTCGC CGAGCAATTG
ATCGACGCGG TCGAATCCGG CGACGAACCG CCCGCGCTCG CGAACGCGCG CCGTCGCGCC
ACCAGCGGAC GCTTCAGCGG CAAGGTCGCG GTCGTCACCG GCGCGGGCAG CGGGATCGGC
CGCTGCGCGG CGCTGGCCTT CGCACGCGAA GGCGCGACGA TCGTCGCCTG CGACATCGAT
CTCGCGAGCG CCGAACGCAC CGCGCTGCTG ATCGGGCTGA CCGGCGCCCA GGCCCATGCG
AAACGCGTCG ACGTCGGGTC CGCCGACGAG ATGGAAGCGC TCGCGGCGTG GGTCGGCAGC
GAACTCGGCG GCGCGGACGT CGTGATCAAC AACGCGGGCA TCGGCATGGC CGGCGGCATC
CTCGACACGA GCGCGCGGCA CTGGGAGCGC ATCCTGCACG TGAACCTGTG GGGCGTGATC
CACGGCTCGC GGCTGTTCGC GCAGCAGATG GCCGCGCGCG GCACCGGCGG GCACATCGTC
AACACCGCGT CGGCCGCCGC GTTCGGCCCG TCGCGCGACC TGCCCGCGTA TGCGACGACG
AAGGCCGCGG TGCTGATGCT CAGCGAATGC ATGCGCGCGG AACTCGCGGA GCAAGGCATC
GGCGTGACGG CCGTGTGCCC CGGTTTCGCG GAAACCGGAA TCATGGCGTC GACGCACTAC
GCGGGCGCCA ACGCACAGGA CGAAGCGCGG CTGCGCAAGC GCGCGACGAA GCTGTACCAG
ATGCGCGGCC TGAAACCGGA AACCGTCGCG CAGGCGATGG TCGACGGCGT GCTGCGCAAC
CGCCCCGTCG TCGCGGTCGG CGGCGAAGCG CACGCGCTGC GCTTCGTCGG CCGCTTCATG
CCGTGGCTGG GCCGGATGAT CGCCCGCGTC AGCATGGCAT CGCATTGA
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| Protein sequence | MQPLSDEAPL ALFESVHSET AVASGDLTLA VRTWGDPARS PVVLVHGYPD DSSVWQHVAP
LLARRHYVIA YDVRGAGLSG VPTRTADYHL AKLTDDFVAV IDALCPGRAV HLVAHDWGSI
QGWEFVTDPR LAGRIASYTS CSGPCLDHVG FWLRERVLHP TPASLAKLGG QLVRSWYVYL
FHLPFIPELG WRLWLGRAWP SLLRRLEKTP AAPRPTQADD GAHGVRLYRA NFIRCLFAPR
ERYAHAPVQT IVPLGDKYVS PALSENLSRW VPQYYRREVA AGHWLPLADP ARFAALAEQL
IDAVESGDEP PALANARRRA TSGRFSGKVA VVTGAGSGIG RCAALAFARE GATIVACDID
LASAERTALL IGLTGAQAHA KRVDVGSADE MEALAAWVGS ELGGADVVIN NAGIGMAGGI
LDTSARHWER ILHVNLWGVI HGSRLFAQQM AARGTGGHIV NTASAAAFGP SRDLPAYATT
KAAVLMLSEC MRAELAEQGI GVTAVCPGFA ETGIMASTHY AGANAQDEAR LRKRATKLYQ
MRGLKPETVA QAMVDGVLRN RPVVAVGGEA HALRFVGRFM PWLGRMIARV SMASH
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