| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4966 |
|---|
| Symbol | |
|---|
| ID | 4452785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 1976165 |
|---|
| End bp | 1976938 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639697022 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_838593 |
|---|
| Protein GI | 116693060 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.848801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.340284 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGTT ACACGTTCGG CTTCAGCAGC GTCCTCGTCG TCTTCGTCGT GGTGCTCGTC
GCGTCGTCGA TCCGCATCTT TCGCGAGTAC GAGCGCGGCG TCGTGTTCAT GCTCGGCCGG
TTCTGGAAAG TGAAGGGGCC GGGGCTGGTG CTGATCATCC CGATCGTCCA GCAGGTCGTG
CGGATCGACC TGCGCACCGT CGTGTTCGAC GTGCCGGCGC AGGACGTGAT CACGCGCGAC
AACGTGTCGG TGAAGGTCAA TGCGGTCGTG TATTTCCGCG TCGTCGATCC GGAGAAGGCC
GTGATCCAGG TCGCGCGCTT CTTCGAGGCG ACGAGCCAGC TCGCGCAGAC GACGCTGCGC
GCGGTGCTCG GCAAGCACGA ACTCGACGCG CTGCTCGCCG AGCGCGAACA ATTGAACGCG
GACATCCAGA AGACGCTCGA CGCGCAGACC GATGCGTGGG GGATCAAGGT GTCGACGGTC
GAGATCAAGC ACGTCGACCT GAACGAGACG ATGATCCGCG CGATTGCGCG GCAGGCGGAA
GCCGAGCGCG AGCGGCGCGC GAAGGTGATT CATGCGGAAG GTGAGCTTCA GGCGTCGGAG
AAGCTGCTGC AGGCCGCGCA GCGGCTCGCG CTGCAGCCGC AGGCGATGCA GTTGCGCTAT
CTGCAGACGC TGACGACGAT CGCGGCGGAC AAGAATTCGA CGATCGTGTT TCCGCTGCCG
GTCGATCTGC TGGGGGCGTT GCTGGATCGG CTGGGCCCGT CGCGCGAGCC TTAA
|
|---|
| Protein sequence | MIGYTFGFSS VLVVFVVVLV ASSIRIFREY ERGVVFMLGR FWKVKGPGLV LIIPIVQQVV
RIDLRTVVFD VPAQDVITRD NVSVKVNAVV YFRVVDPEKA VIQVARFFEA TSQLAQTTLR
AVLGKHELDA LLAEREQLNA DIQKTLDAQT DAWGIKVSTV EIKHVDLNET MIRAIARQAE
AERERRAKVI HAEGELQASE KLLQAAQRLA LQPQAMQLRY LQTLTTIAAD KNSTIVFPLP
VDLLGALLDR LGPSREP
|
|---|
| |