| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4957 |
|---|
| Symbol | |
|---|
| ID | 4452776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 1964744 |
|---|
| End bp | 1965697 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639697013 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_838584 |
|---|
| Protein GI | 116693051 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.132685 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGGG GAATCTCAGG CCCCAATCGA TGCAACGCAC AACCCGCCAT GACCGACAGA
CTCGACGGCG TGACGACCTT CGTCCAGGTC GTGGAATCCG GCAGCTTCGC GCTCGCCGCG
GAACGGCTCG ACATGACGCG CTCGGCCGTC GGCAAGGCGA TCGCGCGGCT CGAGAAGCGG
CTCGGCGCGC GGCTGCTGCA GCGCACGACG CGCAGCCAGA GCCTGACCGA CGACGGCCAG
GCGTACTACG ACCGCTGCGT GCGCGCGCTG GCGGAACTGG AAGCGGCGGA AGCCGATCTC
GACTGCGGCC GCCACGAGGC GCGCGGCAAG CTGCGGCTGA GCGTGCCGCT CGCATTCGGG
CATCACTGCG TGACGCCGAT CGTGCTCGAC CTCGCGCGCA CTTACCCGCA CCTGCGGATC
GACGTGTCGA TCACCGACCG TTTCGTCGAT CTCGTCGAGG AAGGGATCGA CCTCGCGGTG
CGGATCGGCC CGCTCGCCGA CAGCACGAGC CTCGCGGTGC GGCGGCTCGG CACGCAATAC
GGGAGCCTCG GCGCGGCGCC GTCGTATCTC GCTCGCCACG GCACACCGCA ATCGCTCGAC
GATCTGAAAA ACCACCGCAC GATCGCGTAT TCACGCTCGG GCGTCGTGCA GCCGTGGTAC
CTGCGTGCGC CGGACGGCTC GAGCGTCCAC ATCGACATGC CGCACCAGCT CAGTTTCGAC
GACGTGCAGG CGATCGCGGC GGCCGGTGCG TCGGGGTTCG GGATCGCGTG GCTGCCGAGC
TGGCTGCTCG ATCACTACGT GAAGCGCGGG GAGATGGTGG TCGTGCTCGA TCGCTGTTTC
GTCTGCGAAG GCGACATTCA TGCGATCTGG CCGAAAACGC GCTACCTGCC ACGCAAGACG
CGCTGCGTGA TCGATGCGCT CGTGGAGGCG GTACCGCCGA TGATCGAGCG CTGA
|
|---|
| Protein sequence | MDWGISGPNR CNAQPAMTDR LDGVTTFVQV VESGSFALAA ERLDMTRSAV GKAIARLEKR
LGARLLQRTT RSQSLTDDGQ AYYDRCVRAL AELEAAEADL DCGRHEARGK LRLSVPLAFG
HHCVTPIVLD LARTYPHLRI DVSITDRFVD LVEEGIDLAV RIGPLADSTS LAVRRLGTQY
GSLGAAPSYL ARHGTPQSLD DLKNHRTIAY SRSGVVQPWY LRAPDGSSVH IDMPHQLSFD
DVQAIAAAGA SGFGIAWLPS WLLDHYVKRG EMVVVLDRCF VCEGDIHAIW PKTRYLPRKT
RCVIDALVEA VPPMIER
|
|---|
| |