| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4955 |
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| Symbol | |
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| ID | 4452774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 1961644 |
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| End bp | 1963023 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639697011 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_838582 |
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| Protein GI | 116693049 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.525956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0720894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA TGCATTCCTC CCCGCTTCAC CGTCTCGGCG CATTCGCGTG CGCGGCCGCA
CTGCTCGCCG GCTGCGCGGG TGCGCGCCAT GATCCGCTGC CCGCCGTCGC GATGCCCGCG
AACTGGGCCG CGCCGGTCGC GGCCGACGCG CCGGCCGCCA CGGGCGACTG GTGGCGCAGT
TTCGGCGATC CGCAACTCGA CGCATTGATC GACGACGCGC TGCGCGCCAA CAACGATCTC
GCGATCGCGG CGATCCGCGT GTATCGCGCA CAGTTGCAGG CCGGGCTCGT CGATACGAAC
CTGACGCCCA ACGTGACGCT CGGCGCGAAC GGCGCCGTAT CGCGTACGCT CGACACGCAC
CAGATGAGCC GTTCGAGCGG TGTCAATGGT TCGCTCAGCT ATGAACTCGA CCTGTGGGGC
CGGCTGGCCG CGCTGCGCGA CGCCGCGCAC TGGGAGGCCG ACGCGACCGC CGACGATCTG
GAAGCCGCAC GGCTGTCGCT GATCGGCACG ACCGCGGCGC TGTACTGGCA GATCGGCTAT
CTGAACCGGC AGATCGCGCT CGGCGACGCG AATATTGCGT ATGCGGAGCG CACGCTCGCG
CTCGTGCGGT CGCGGCACAC GGCCGGCGCC GTGTCGGGGC TCGACCTCGC GCAGGCCGAA
CAGAGCCTCG CCGCGCAACG CGCGGCGCAG ACGCAGCTGA TCCAGCAGCG CACCGAGAAC
CGCCACGCGC TCGCGATCCT GTTCGACCGG CCGCCGCAGC AGCGCGCGGC CGAGCCGGCT
GCGTTGCCCG ACGCCGCACC GCCCGACGTG GCGGCCGGCC TGCCCGCCAG CCTGCTCGGC
CGGCGCCCCG ACCTGCGTGC GGCGGAATTC CGGCTGCGCG AATCGCTTGC GCAGGTCGAC
GCGACGCGCA CCAGCTTCTA TCCGACCTTC ACGCTGACCG GCAGCGCCGG CACGACGAGC
ACGAGCCTCG AGCGCGTGCT GACGAATCCG GTCGGCACGC TCGGGCTCGG CCTCGCGCTG
CCGTTCATCC AGTGGAACAC GATGCAGTTG CAGATCAGGG TGTCGAAGTC GCAGTACGAG
GAAGCGGTCG TCGGGTTCCG CCAGCGGCTC TACACGGCGC TCGCGGAAGT CGAGAACGCG
CTGTCGGCGC GCGTGCAGCT CGAACGCGAA GCCGAACAGC GCACGCTGTC GCTCGCCCAG
GCCCAGCGCG CCGAACGGCT GGCCGCCGCG CGCTTCGCGG CCGGCGCGAC CGCCGTGCAG
CCGTGGCTCG ATCAGCAGCA GGTGCTGCGG AGCGCACAAA GCGCCGACGA ACTGACGCGT
CTGAACCGGC TCAACAACCA GATGAAGCTC TACCGCGCGC TCGGCGGCGG GACTTCCTGA
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| Protein sequence | MAIMHSSPLH RLGAFACAAA LLAGCAGARH DPLPAVAMPA NWAAPVAADA PAATGDWWRS
FGDPQLDALI DDALRANNDL AIAAIRVYRA QLQAGLVDTN LTPNVTLGAN GAVSRTLDTH
QMSRSSGVNG SLSYELDLWG RLAALRDAAH WEADATADDL EAARLSLIGT TAALYWQIGY
LNRQIALGDA NIAYAERTLA LVRSRHTAGA VSGLDLAQAE QSLAAQRAAQ TQLIQQRTEN
RHALAILFDR PPQQRAAEPA ALPDAAPPDV AAGLPASLLG RRPDLRAAEF RLRESLAQVD
ATRTSFYPTF TLTGSAGTTS TSLERVLTNP VGTLGLGLAL PFIQWNTMQL QIRVSKSQYE
EAVVGFRQRL YTALAEVENA LSARVQLERE AEQRTLSLAQ AQRAERLAAA RFAAGATAVQ
PWLDQQQVLR SAQSADELTR LNRLNNQMKL YRALGGGTS
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