| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4954 |
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| Symbol | |
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| ID | 4452773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 1959592 |
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| End bp | 1961637 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639697010 |
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| Product | ABC transporter related |
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| Protein accession | YP_838581 |
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| Protein GI | 116693048 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0415826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0801144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAGC CCCTGCTGAA ACTCGCCGCC GTCACGCGAC GCTTTCCGGC CGGCGACAAG
GACGTCGTCG TGCTGAACAA CGTCAACCTG TCGATCGGCG CGGGCGAGAT CGTCGCGATC
GTCGGCGCGT CGGGCTCCGG CAAGTCGACG CTGATGAACA TCCTCGGCTG CCTCGATCAT
CCGAGCGAAG GCACGTACAC GGTCGGCGGA CGTGACACGC ACATGCTCGA CAGCGACGAA
CTCGCGCAGC TGCGCCGCGA GCACTTCGGC TTCGTGTTCC AGCGCTATCA CCTGCTGCCG
CACGTCGACG CGGTCGCGAA CCTCGAAATG CCGGCGATCT ACGCGGGCAC CCCGCGCGCC
GATCGGCACG CCCGCGCCCG CGAACTGCTC GCGCGCCTCG GGCTCGCGGA TCGCGCGCAT
CACCGGCCCG GCCAACTGTC CGGCGGCCAG CAGCAGCGCG TGAGCATCGC GCGCGCGCTG
ATGAACGGCG GCCAGGTGAT CCTCGCGGAC GAACCGACCG GCGCGCTCGA CACGAAAAGC
GGCCAGGACG TGATCCGCAT CCTGCACGAG CTGAACGCGC TCGGCCATAC GATCGTGATC
GTCACGCACG ACAAGGCCGT GGCGCGCCAT GCGCGGCGCA TCATCGAGAT CAGCGACGGC
GAGATCGTCG CGGACCGGCC GAACCGCCAC TACGCGGAGG CATTCGCGGA AGTGGGCGTC
GGCGCGGCCG CAACGACGGA AACGGCAGCC GACACGCGGT CCGCGCCGGC TTCCGGCGAC
GCACCGCCGC CCGCCAATAA CGATACCGCC GCCGATCCCG CCCCCCGCGC CCGACGCTTC
GCCGCCGGCA CCGGCCGTTT CGCCGAAGCA TGCCGGATGG CGTGGATCGC GCTCGTGTCG
CACCGGCTGC GCACGCTGCT GACGATGCTC GGCATCATCA TCGGCATTAC GTCGGTCGTG
TCGATCGTCG CGGTCGGCGA AGGCGCGAAG CGCTACATGC TCGAAGAAAT CGGCAGCATC
GGCACCAATA CGATCAGCCT CTATCCGGGC TCCGACTGGG GCGACAGCCG CGCGGACACG
ATCCAGACGC TCGTGCCCGC CGACGTCGCC GCGCTCGCCG AGCAGCCGTA CGTCGACAGC
GCGACGCCCG AAACGTCGCG CACGCTGCTG CTGCGCTACC GCAACGTCGA CGTCCACGCG
CTCGTGAGCG GCGTCGGCGA CAGCTACTTC CAGACGCGCG GAATGCGCTT CGCGCTCGGC
GTCCCGTTCG ACGACGATGC GGTGCGCCGC CAGGCGCAAG TGGCCGTGAT CGACCAGAAC
ACGCGCCGCA AGCTGTTCGG CGCGACGCGC AATCCGGTCG GCGAAGCGAT CCTGGTCGAC
AACGTGCCGT GCGTCGTGAT CGGTGTGACC GCCGACAAGA AGAGCGCGTT CGGCAGCGTG
AAGAGCCTGA ACGTGTGGGT GCCGTACACG ACCGCGAGCG GGCGCCTGTT CGGCCAGCGC
TATCTCGACA GCATCACCGT GCGCGTGCGC GACGGGCAGC CGAGCGCCGC CGCCGAGAAA
AGCCTCGAGA AGCTGATGAT CCAGCGCCAC GGCCGCAAGG ACTTCTTCAC GTACAACATG
GACAGCGTGG TCAAGACCGT CGAGAAGACC GGCCAGTCAC TCACACTGCT GCTGTCGCTG
ATCGCGGTGA TCTCGCTCGT GGTCGGCGGG ATCGGCGTGA TGAACATCAT GCTGGTGTCG
GTCACCGAGC GCACGCGCGA GATCGGCATC CGGATGGCGG TCGGTGCGCG CCAGTCCGAC
ATCCTGCAGC AGTTCCTCGT CGAGGCCGTG CTCGTCTGCC TGCTCGGCGG CACGATCGGC
ATCGCGCTGT CGTTCGGGCT CGGCGCGCTG TTCTCGGTGT TCGTCGCGCA GTGGAAGATG
GTGTTCTCGG CCGGCGCGAT CGTGACGGCG TTCGTGTGCT CGACGCTCAC CGGCGTGATT
TTCGGCTTCA TGCCCGCGCG CAACGCGTCG CGGCTCGACC CGATCGATGC GCTCGCGCGC
GACTGA
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| Protein sequence | MRQPLLKLAA VTRRFPAGDK DVVVLNNVNL SIGAGEIVAI VGASGSGKST LMNILGCLDH
PSEGTYTVGG RDTHMLDSDE LAQLRREHFG FVFQRYHLLP HVDAVANLEM PAIYAGTPRA
DRHARARELL ARLGLADRAH HRPGQLSGGQ QQRVSIARAL MNGGQVILAD EPTGALDTKS
GQDVIRILHE LNALGHTIVI VTHDKAVARH ARRIIEISDG EIVADRPNRH YAEAFAEVGV
GAAATTETAA DTRSAPASGD APPPANNDTA ADPAPRARRF AAGTGRFAEA CRMAWIALVS
HRLRTLLTML GIIIGITSVV SIVAVGEGAK RYMLEEIGSI GTNTISLYPG SDWGDSRADT
IQTLVPADVA ALAEQPYVDS ATPETSRTLL LRYRNVDVHA LVSGVGDSYF QTRGMRFALG
VPFDDDAVRR QAQVAVIDQN TRRKLFGATR NPVGEAILVD NVPCVVIGVT ADKKSAFGSV
KSLNVWVPYT TASGRLFGQR YLDSITVRVR DGQPSAAAEK SLEKLMIQRH GRKDFFTYNM
DSVVKTVEKT GQSLTLLLSL IAVISLVVGG IGVMNIMLVS VTERTREIGI RMAVGARQSD
ILQQFLVEAV LVCLLGGTIG IALSFGLGAL FSVFVAQWKM VFSAGAIVTA FVCSTLTGVI
FGFMPARNAS RLDPIDALAR D
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