| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4948 |
|---|
| Symbol | |
|---|
| ID | 4452627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 1953372 |
|---|
| End bp | 1954103 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639697004 |
|---|
| Product | ribonuclease T2 |
|---|
| Protein accession | YP_838575 |
|---|
| Protein GI | 116693042 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG3719] Ribonuclease I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00198544 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGA CGCTCGCCCG CGCCGCTGCC GCACTCGCCG TCGCTTCCGT TTCACTGCAC
GCCGCCGCGC AGACCAGTTA CGACTACCTG TTGCTCGCCG CGTCGTGGGA GCCGGGTTTC
TGCGCGTCGC ACGACACCCC GGAATGCACG AACCTCGCCG GCTCGTACGC GGCGACGAGC
CTGTCGCTGC ACGGGCTGTG GCCGAACCGC TACGACGGCA ACCAGCCGTT CTACTGCGGC
GTGCCGCAGA ACGACATCGA CCTCGACAAC GCGCACCAGT GGTGCAGCAT GGACGCGTAC
CCGATCAGCA GCGCGACCCG CAACACGCTG TCGACGTACA TGCCGGGCGT TGCTTCGTGC
CTCGACAAGC ACGAATGGTT CAAGCACGGC ACGTGTTCGA ATTCGGCGAC GCCCGATGCG
TACTGGAACC AGGCGTCGGG CATGATCAGC CGGCTCGGCA ACACGTCGTT CAACGCGTTC
CTGCAGGCGA ACGCGGGCAA GACGGTCACG CGTAACCAGT TGCTGTCGGC GTTCGAAGGC
GCGTTCGGCA GCAACACGCG CAGCGCGGTG TCGCTGAAGT GCACGAAGAC GAACGGCGTG
AGCTATTTCA CCGAAGCATG GATCGCGGTG AAGACGAATG CGACCGCGCA ATTTCCGAGC
GCGGCGTCGC TCGTGACGGA CGGCAATACG CAGGGCACGT GTCCGACGTC GGGGGTGTTT
ATCGCGAAGT GA
|
|---|
| Protein sequence | MLKTLARAAA ALAVASVSLH AAAQTSYDYL LLAASWEPGF CASHDTPECT NLAGSYAATS
LSLHGLWPNR YDGNQPFYCG VPQNDIDLDN AHQWCSMDAY PISSATRNTL STYMPGVASC
LDKHEWFKHG TCSNSATPDA YWNQASGMIS RLGNTSFNAF LQANAGKTVT RNQLLSAFEG
AFGSNTRSAV SLKCTKTNGV SYFTEAWIAV KTNATAQFPS AASLVTDGNT QGTCPTSGVF
IAK
|
|---|
| |