Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4937 |
Symbol | |
ID | 4452616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1942167 |
End bp | 1944578 |
Gene Length | 2412 bp |
Protein Length | 803 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639696993 |
Product | patatin |
Protein accession | YP_838564 |
Protein GI | 116693031 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000295709 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACAGCGA CCGCTTTCTT CCGCTGGGCG CCGCTGGGCC CGCTCTGCAC GACGCTCGTT GCCTTCTGGT GCTGCACGCT CGCCGCGCAA CCGCTGCCGG CCGCCGAATC CGCCGCTGCC CAGACCGTTG CCGCTGCAGC CAACGCGCCG GCCGCCGCCA CGCCCACCGC ACCCGCTGCG TCCGCGCACA CCTGCACGGC CGACGGCGGC CCGGCCGGCC GCCCGTCGAT CGGCCTCGTG CTGTCCGGCG GCGGTGCGCG CGGCTATGCA CACCTCGGGG TCCTGAAAGT CCTGGAGGAC AACCGGATTC CGATCGACTG CATCGCGGGC ACCAGCATGG GCGCCGTGGT CGGCGGCCTG TATGCGAGCG GGATGGCGGC CGACGAGATG CAGAGGCGGC TGTCCGAGGT CAACCTGGCG GATATCGCGT TCGACGTGAC GGATCGCGCG GACCTGCCGC AAACCAGCCG CGAGGACGAA CGCCTGTACA TCAACGGGCT GACGCTCGGC TTCGGCAAAA AGGGCGTCAA GGCGCCGGTC GGCCTCGTCC AGGGCAACCG GCTGCAGGCG CTGCTCGCGA ACTGGACGGC CGCCGTGCCG ACCAACCAGC CGTTCGACCA GTTGCCGATC CCGTACCGCG CGGTCGCGAC CGACCTGCAG ACCGGCCAGA TGGTCGTGCT CGACCACGGC TCGCTGCCGC TCGCGATTCG CGCGAGCATG GCGATGCCGG GCCTGTTCGC GCCGGCCGAG ATCAACGGGC GCGCGCTCGT GGACGGCGGC CTCGTCAGCA ACCTGCCCGT CGACACCGCG CGGCAGATGG GCGCGAACGT CGTGATCGCC GTCGACATCG GCTCGCAACT GCGCCCGCTC GACGCGCTCG CGTCGCCGGC CGACGTGATG CAGCAGATGG TCGGCATCCT GATCCGCCAG AACGTGACCG CGCAGCGCAA GCAGCTCGAC GCGCGGGACG TGCTGCTCAC GCCGGACCTG GGCTCGCTCG CGTTCACGGA TTTCCAGAAC GCGAAGCAGG CGATCGCCGC CGGCGCGGCC GCCGCGACCG CGGCGCTGCC GAAGCTGCGG CGCTTCGCGC TCACGCCGGA ACAGTACGCG GCCTACCGGT CCTCACATGC GCAGCCGCTG CCGCCGCCGA TCCGGATCAC GCGCATCGAC ATCAAGACCA GCGGCGGCGT GCCGAAGCGC GTCGTCAGCA ACGCGCTGCA CGTGAAACCG GGCGACATCT ATGATCCGAA GACCGTCAGC CAGGACCTGC TCGGCCTCAC GACGGGCGGC AACTTCGAGA GCGTCACGCA GCAGATCGTC AGCCGCGGCG ACGACAACGT GCTCGAGATC GACGCGCGCG AGAAGTACTG GGGGCCCAAC TTCCTGCTGT TCGGGCTCGG CATGTCGAGC AGTTCGACCG ACGAAGGCGG CTTCCGCCTG CACGTCGGCT ACCGGCGGCC GTGGCTCACG GAATCGGGGC TCGAATTCCG CGCGGACACG ACGATCGGCA GCGACCTGCA GTCGGCGCGC GTCGAATTGC GCCAGCCGCT GTCGACCGCG TACGGCGTCT ACCTGTCGCC GTACGCGGAA TATCAGCGTC GCTACGCGAA CCTGTACGAC GACTCCGGCG ACGTGAAGAT CACGCAGTAC CTGATGCAGA CGGCGCGCGC CGGGATCGAC CTCGGCCTGC CGATCGCGCG GCTCGGCGAT TTCCGCATCG GTCTCGGCTA CGTGACCGGG CACGGCTCGC CGACCTACAA CCTGCCGTTC GACGACGGCA GCGGCCAGGC GCTGCTATGG CCGAGCTTCA CGTCGCAGGC GTTGATCGCG CGGGCGCGGC TCGTCATCGA TCAGCTCGAC GATCCGATGT TCCCGCGCAA GGGTTATTTC GGCGAACTGC GGGTCGAACG CTCGCTGGTG TCGCGCAACG GCGGCTCGGC ACAGGATTTC GCCGACGGGA TCAGCAACGC GCCTTACACC GAGATCTACG GCAAGGCGAT GATCGCGCAG CAGTTCGGCC GGCACAGCGT CAGCGCGACG ATCGAAGGCG GCAAGAGCAT CGGCGGCACC AACCTGATCA ATGCGTTCAA CTTCACGCTG GGCGGCTTCC AGCATCTGTC TGCCTATGCG GCCGACCAGT TGAACGGCAA CGAGCTCGCG TACGGACAGA TCACGTACAT GAACCAGTTG ATGACGTTCA ACGCGTCGCC GATCAAGGCG CTGTCGGTGG GCGCCAGCGC GGAAGTCGGC AACGTCTGGT CGAGCGGCCA GAAGATCGGC GGCGGCGCGC TCAAGCAGAG CTACACGTTC TTCACGAGCC TGTCGACCGC ATTCGGGCCC GTCTATATCG GCGTGGCGCT CGCGCCCAGC GGCCGACGCA ACTTCTACCT GCAGCTCGGC CGTACTTATT GA
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Protein sequence | MTATAFFRWA PLGPLCTTLV AFWCCTLAAQ PLPAAESAAA QTVAAAANAP AAATPTAPAA SAHTCTADGG PAGRPSIGLV LSGGGARGYA HLGVLKVLED NRIPIDCIAG TSMGAVVGGL YASGMAADEM QRRLSEVNLA DIAFDVTDRA DLPQTSREDE RLYINGLTLG FGKKGVKAPV GLVQGNRLQA LLANWTAAVP TNQPFDQLPI PYRAVATDLQ TGQMVVLDHG SLPLAIRASM AMPGLFAPAE INGRALVDGG LVSNLPVDTA RQMGANVVIA VDIGSQLRPL DALASPADVM QQMVGILIRQ NVTAQRKQLD ARDVLLTPDL GSLAFTDFQN AKQAIAAGAA AATAALPKLR RFALTPEQYA AYRSSHAQPL PPPIRITRID IKTSGGVPKR VVSNALHVKP GDIYDPKTVS QDLLGLTTGG NFESVTQQIV SRGDDNVLEI DAREKYWGPN FLLFGLGMSS SSTDEGGFRL HVGYRRPWLT ESGLEFRADT TIGSDLQSAR VELRQPLSTA YGVYLSPYAE YQRRYANLYD DSGDVKITQY LMQTARAGID LGLPIARLGD FRIGLGYVTG HGSPTYNLPF DDGSGQALLW PSFTSQALIA RARLVIDQLD DPMFPRKGYF GELRVERSLV SRNGGSAQDF ADGISNAPYT EIYGKAMIAQ QFGRHSVSAT IEGGKSIGGT NLINAFNFTL GGFQHLSAYA ADQLNGNELA YGQITYMNQL MTFNASPIKA LSVGASAEVG NVWSSGQKIG GGALKQSYTF FTSLSTAFGP VYIGVALAPS GRRNFYLQLG RTY
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