| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4933 |
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| Symbol | |
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| ID | 4452559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 1932186 |
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| End bp | 1939226 |
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| Gene Length | 7041 bp |
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| Protein Length | 2346 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639696989 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_838560 |
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| Protein GI | 116693027 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.348524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000124828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGTTTCTGG CGCTGTCGGG CGCGGGCATC GTTCCCGCCC ACGCGACCTG CAGCACGGCG
GGCACCACGG TGACCTGTTC CGGCGTCGCG AATCCGCTGG CGCCCAGTTA TTCGAACAGC
GCCAACAACG TGAACGCGAC GGTCAACCCC GGTGCAAGCG TCGGCGTGCT GCTCGGCGTC
GGCGGCACGG CGATGTCGCT GACCGGCAAT AACGTCACGC TGACCAACAA CGGCACGATC
GACCCGTCGG CGCTCGGCTC GGGGCTCGGC GTGCTGTCGA GCGGCACGGT GGTCGGCAAC
GCGGCGGCGA GCACCACGAC CGTGACCAAC AACGGCACGA TGATGGGCTC GACCGGCGTG
GCGATCAGCG GCGTGACGGG CATGGCGCTG TCGGTTCAAA ACGGCGCGGG CGGCACGTCG
ACGATTACGA ACACGGGTAC GATCGGCTCC TCCCCGCTGG TCGGCGCGAC GCTGACCGGC
GCCGATGCGC CGGTGGTCGC CGCGTACGGC GGCGGCACGG TCAACATGTC GAACAGCGGA
ACGATCACCG GTCGCGTGTC GTTGGGGTCG AGCGGCACAC CGGGGCAGGG CAATACGTTC
ACCAACTCGG GCACGATCAA CGGCGGCGTG TCGATGGGGG CGAACAGCAC GAATACGTTC
AATGCCGTGA CGGGCTCGTC GGTCAACACG GCCGGCGGCA CCGGCGGCGC ATTCAACATC
ACGGTCGGGC CGATCACGCT CGGCGTGGCG GCAACCGGCG TGGTCGACGG CGGCGCGGGC
GGCAACAACA CGCTCAACCT GCAGCAGGGA ACTGCGGCGA ACGGCACGAT CGCGGCCAAC
AACTACATCA ACTTCAATCA CCTCGACGTC ACGAGCGGCA ACTGGACGAT CAACGGCGCG
TCCACCGCGC AGGACGCGAC GCTGTCGGGC GGCGTGGCGA TCATCAACAA CAACGCGTCG
CTCGGCACCG GTACCGTCAC GGGCAACGGC GGCGCGTTGC AGGCCGGCAC GACGGGGCTC
AACGTCTCCA ACAACGTGTC GCTTGGCGCG GGCGGCCTGA CGGTGCAGGG TGCGACCGGG
CTGACGCTGT CCGGCACAGT GTCGGGGGGC GGCGCGTTGA CAAAGAACGA TGGCGGCACG
CTGACGCTGT CCGGCGCGAA CAGCTACACA GGCGCCACGA ACCTGAATGC CGGCGGCCTG
GTGGTCGGCA ACAATTCGGC GCTCGGCATC GGCGCGCTGA ACGTCAACGC GTCGGCGTCG
CTCGACGCGA GCACGAACGT GACGCTCGGC AACACGGTCA ATCTTGCCAC CGGCTCGACG
CTGACGCTCG GCGGCAGCAA CGCTCTCGGG CTGACCGGCA CGATCAGCGG CAGCGGCGGC
CTCACGAAGA ACGGCGCGGC GACCACGACG CTGAGCGGCG TGAATACGTA TACGGGCGAT
ACGACCATCA ACAGCGGCAC GCTCGCGCTG AACGGAGCCG GCAGCCTGTC GGCGACCGGC
ACGGTCAACC TGACCGGTGC GGGCGCAACG TTCGACGTGA CCGGTGCGTC GGGCGCGCGG
ACCATCGGCT CGCTGGCCGG CGCGGCCGGC ACGAACGTGA CCCTTGGCGC CAATTCGCTG
ACGCTCAACG GCAGTGGCAA TGCGACCTAT GCCGGCACGA TCGGCGGGTC CGGCAGCGTG
ACGCTGTCGG GTACCGGCAC GCAATCGCTG ACGGGCACGA ACGTGTACAC CGGCGGCACC
AACCTGAACG GCGGCAACCT CGTCGTCGGC AGCAATACGT CGCTCGGCAT CGGCGCGGTG
AACGTGAACG GCTCGTCGAC GCTCGATGCG ACCACCAACG TGACGCTCGC GAACGGCGTC
AACCTCGCGA CGGGCACGAC GCTGACCCTT GGCGGTAGCA CCGACCTCGG CCTCGGCGGC
GTGGTTTCCG GCGGTGGCGG TCTCGTGAAG AACGGTGCGG CGACGCTCAC GCTGTCGGGC
GCGAACAACT ATGCAGGCGG CACGACGCTG AATGCTGGCG GACTGGTGCT CGGCAACGGC
TCGGCGCTCG GCACCGGCGC GCTGACCGTC GGCGGCTCGG CGACGCTCGA TACGAACACG
AACCTCACGG TCGGCAACGC GATCAACCTC ACGACGGGCA ATACGCTGAC GCTCGGCGGC
AGCAACGCGC TCGGGCTGAG CGGTGCGATT TCCGGCACGG GCAGCCTCGT GAAGAACGGC
GCGGCGACCA CGACGCTGAC GGGCGCGAAC ACGTACACGG GCGGCACGAC GATCAATGCC
GGCACGCTGG CGATCGGCGC GGGCGGCAGC CTGTCGTCCA CGGGGACGGT GAACCTGGTC
AATCCGGGGG CCGCACTGGA CATCAGCGCG GGCAGCGCGC AGTCGATCGG CGCGCTGTCG
GGCGCCATCG GCACGAGCGT GAGCCTCGGC GCCAACGCAC TGACGCTGGG CGGGACCGCG
AGCGGCACGT TCAGCGGCAC GATCGGCGGC ACCGGCAGCC TGACGCTGGC GGGTACCGGC
ACGCAGACGC TGAACGGCGC AAATACCTAC ACCGGCGGGA CGAATCTCAA TAGCGGCAGC
CTCGTGCTCG GCAACAACGG GGCACTCGGC TTCGGTGCGC TGAACGTCGG CGGCGCGGCC
ACGCTCGATA CGAATGCGAC CTTGTCGGTT GGCAATGCAA TCAATCTCGG CACGGGCGCT
GCACTGACGC TGGGGGGGAG CAACAATCTC GCACTGGGCG GCGCGATTTC CGGCGCGGGC
AGCCTCGTGA AGGACGGTGC GGCCACCACC ACGCTGACCG GCGTGAATAC CTACACGGGC
GGCACGACGG TCAACGGCGG CACGCTGGCG ATCGGCGCGG GCGGCAGTCT CGCGTCGACC
GGCACGATGA ACCTCGCAGG CGCCGGTGCG ATGCTGGACC TGAGCGCCGC GACGGGCGGC
CAGACGCTCG GTGCGCTGTC GGGTGTCACG GGCACGAACC TCAACCTCGG CGGCAACGCG
CTGACGCTGG GCGGGACCGC CAGCGGCACG TTCAGCGGCG CGATCGGCGG CACCGGCAGC
CTGACGCTCG CGGGCACCGG CACGCAGACG CTGAACGGCG CGAGCACCTA TTCCGGCGGG
ACGAACCTCA ATAGCGGCGG CCTGGTGCTC GGCAACAATG GGGCACTCGG CTTCGGTGCG
CTGAACGTCG GGGGCGCGGC CACGCTCGAT ACGAATGCGA CCTTGTCGGT CGGCAATGCG
GTCAATCTCG GTACGGGCGC CGCGCTGACG CTGGGCGGCA GCAACAGTCT CACGCTGGGC
GGTGCGATTT CCGGTGCGGG CAGCCTCGTG AAGGACGGTG CGGCCACCAC CACGCTGACC
GGCGCGAATA CCTACACGGG CGGCACGACG ATCAACGCAG GGACGCTGGC GGTGAGCGCG
GGCGGCAGCC TCGCATCGAC CGGCGCGATG AACCTGGCAG GCGCCGGCGC GACGCTCGAT
CTGAGTGCCG CGACGGGCGC ACAAACGCTC GGCGCATTGT CGGGTGTCGC GGGAACGAGC
CTCAACCTCG GCGGCAACGC ACTGACGCTG GGCGGTACGG CCAGCGGCAC GTTCGGCGGG
GTGATCGGCG GCACCGGCGG TCTCACGTTG TCGGGCACCG GCACGCAGAC GCTGTCCGGC
GCGAACACCT ATACGGGCGG CACGACGATC AACAGCGGCA GCACGCTGGC ACTCGGCGCG
GGCGGCAGCC TGGCGTCGAC CGGCACGGTG AACCTGACCG GGTCGGGCGC GACGTTCAAC
CTGAGCGGCG CATCGGGCGC GCAGACGATC GGCGCACTGA CCGGCGCGGC CGGCACGAAC
GTGAACCTCG GCGGCAACGG GCTGACGCTG AGCAGCGCGG GCAACTATGC GTTCGGCGGC
GCGATCGGCG GCACGGGCGG CCTGACGCTG GCCGGCGCGG GTACGCAAAC GCTGACGGGC
GCGAACACCT ACACGGGCGG GACGACGATC GGCGGCGGCA GCACGCTCGC ACTCGGCGCA
GGCGGCAGCC TCGCCGCGAC CGGCGCCGTG AACCTCGCGG CCGCGGGGGC GACGTTCGAC
GTGAGCGGCG CGTCGGGCGC GCAGACGATC GGCGCGCTGA CCGGCGCGGC CGGCACGAAC
GTGGCGTTGG GCGCGAATGC GCTGACGCTG AACGGCAGCG GCAACAACAC GTTCGGCGGC
GCGATCGGCG GAACGGGCGC GGTGACGTTC GCCGGCACGG GCACACAGAC GCTGACGGGG
GCGAACACGT ACACGGGCGG CACGACGATC GGCGGCGGCA GTACGCTGGC GCTCGGCGCG
GGCGGCAGCC TTGCATCGAC GGGCGCGGTG AACCTCGCGG GCGCGGCTGC GACGTTCGAC
GTGAGCGGTG CGACGGGCGC GCAAACGGTC GGCGCGCTGA CCGGCGCAGC CGGCACGAAC
GTGAATCTCG GTGCGAATGC GCTGACGTTG AACGGCAGCG GCAGCGGCAA CGGTACGTTC
GGCGGCACGA TTGGCGGAAC GGCAGGCGTG ACGGTCGCCG GCACGGGTAC ACAAACGCTG
ACGGGCGCGA ACACGTACAC GGGCGGCACG ACGATCAACG GCGGCAGCAC GCTTGCGCTG
GGAGCCGGTG GCAGTCTTGC GTCCGGTAGC GCGGTGAATC TCGCGGGCAC CGGCGCCACG
TTCGACGTGA GCGGCTCGAC CGGCACGCAA ACGATCGGAG CGCTGTCGGG CGCGGCCGGC
ACGAACGTGA ATCTCGGCGC GAATGCGCTG ACGCTGAACG GCAGCGGCAA CACCACGTTC
GGCGGCACGA TCGGCGGAAC GGGCGGCGTG ACGCTGGCCG GCACCGGCAC GCAGACGCTG
ACGGGCGCGA ACACATACAC GGGCGGCACG ACGATCAACG GCGGCAGCAC ACTCGCACTC
GGCGCGGGTG GCAGCCTCGC CTCGACGGGC GCCGTGAATC TCGCGGGCAC CGGAGCAACG
TTCGACGTGA GCGGCGCCAC CGGCACGCAA ACGGTCGGTG CGCTGTCGGG CGCGGCCGGC
ACGAACGTGA ATCTCGGTGC GAATGCACTG GCGCTGAACG GCAGCGGCAG CAGTACGTTC
GGCGGCACGA TCGGTGGCGC GGGCGGGGTG ACGGTGGCGA GCGGCACGCA GATGCTGACC
GGCGACAACA CGTACACCGG CGGCACCACG ATCGCGGCCG GCGGCACGCT GCAACTCGGC
AACGGCGGCA CGTCGGGCAG CGTGGCCGGC AACGTCGTCG ACAACGGTGC GCTGATCGTC
AATCAATCGG GCAACGTGAC GATCGCGAGC GTGCTGTCCG GCACCGGCTC CCTCACCCAG
GCCGGCAGCG GACGACTGAC CCTGACCGGC ACGAGCACGC TGAGCGGCCC GACCACGGTC
GGCGCGGGCA CGCTGGCCGT CAACGGTTCG CTCGGCCAGT CGACCGTCAC CGTGCAGAAC
GGCGCGACGC TGACGGGTAC CGGCACGATC GGCGGTCTCG TGGTGCAGGG CGGCGCGACG
GCGGCCGCCA CGCAACCGGG CGCGGCGCTG AACGTGGGCG GCAACGTCAC GTTCCAGCCG
GGTTCGACGT TCCAGGTCGC CGCCACGCCG CAGCAAAGCG GCAGTCTCGC GGCGAGCGGC
ACGGCGACGC TGAACGGCGG CACCGTACAG GTGCTCGCGA ACCAGAGCGG CTATCAGCCG
AGCACGACGT ACACGATCCT CAGCGCGTCG TCGGGCGTGC AGGGCGCGTT CACCCAGGTG
AGCGCGAACT ACGCGTTCCT CACGCCGACC CTCAGTTACG ATCCGGGCCA CGTGTATCTG
CGGCTGGTTC AGAACGGCAC GTCGCTGCCC GACGTCGCGA CCACGCCGAA CCAGCGCTCG
GTCGCGACCG CGGTGGCCGC GCTCGGCGCC GGCAATCCGC TGTACGACAC GGTGCTGACG
ACCGACGCGC CGACCGCACG CCGTGCGTAC GGGCTGCTCG GCGGCGAACT GCAGGCGAGC
CTGAAGAGCA TGCTGCTGAT CGACAGCCGC TATGTGCGCG ACGCGGTGAC CGATCGCGTC
CGTCAGGGCC TCGCGCCCGG GTCGGGCCCG CTCGCGGCGC TGTCGTCGGG CGGCGCCGCG
CTGTGCGGCG ACAACACGGC CGGCGTGGTC GACCCGACGC TGCCGCCGGA ACGCCGGATC
GGTTCGCGCG ACGGGTGCTA CGGCGGCACG CCTTATCAGC CGGTCGTCTG GGGGCAGGCG
TTCGGCGGCC GCAGCCGGCT CGCCGGCGAC GGCAATGCGT CGTCGATCAA CCGCAGCATG
ACGGGCTTCA TCGCCGGCGC CGACATGGCG CTCAACGACA AGTGGCGCGC GGGTCTGGCC
GCGGGCGTCA CGCACAGCTC GCTCGACAAC GACCAGAGTT CGTCGGCAGC GGTGAACAGC
TACTACCTGT CGCTGTACGG CGGCGCGCAG TACGGCGCGC TCGGCGTGCG CGGCGGTGCG
TCGTACACGT GGTATCGCAT CAACAGCGAC CGCTATCCGG GCTTCGCGGG CTTCTCGGAT
CACGATTCGG CCGGCTACAA CGCGAATTCG GCGCAGGTGT TCGGCGAAGT CGGCTACGCG
CTGCCGGTCG GGCCGGTCGC GATCGAGCCG TTCGCGGGCC TCGCGTATGT GAACCTGCAT
ACCGACGGCT ATACCGAAAG CGGCGGCGCG GCGGCGCTGC GTGCCGGCGG CGAGACGACC
CACGTCGGCT TCTCGACGCT CGGCCTGCGC GCGGCGTCGC AGCTCGGCTC GATCGCGAGC
GGCACGTTCA CCGCGCGCGG GACGGTCGGC TGGCGGCATG CGTTCGGCAA CGTGCGGCCG
TCGTCGGCGT TCACGTTCGC GAACGGCGGC ACGTCGTTCC AGGTGTCGGG CGTGCCGATT
GCGCGCGACA GCGCGGTGCT CGAAGCCGGC ATCGACGCGA ACATCACGAA GCGCCTGACG
CTCGGCCTCA CGTACAGCGG CCAGTACGGC AGCGGCGTGC GCGACAACGC GATCCTCGGC
AACATCCTGT GGAAATTCTG A
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| Protein sequence | MFLALSGAGI VPAHATCSTA GTTVTCSGVA NPLAPSYSNS ANNVNATVNP GASVGVLLGV
GGTAMSLTGN NVTLTNNGTI DPSALGSGLG VLSSGTVVGN AAASTTTVTN NGTMMGSTGV
AISGVTGMAL SVQNGAGGTS TITNTGTIGS SPLVGATLTG ADAPVVAAYG GGTVNMSNSG
TITGRVSLGS SGTPGQGNTF TNSGTINGGV SMGANSTNTF NAVTGSSVNT AGGTGGAFNI
TVGPITLGVA ATGVVDGGAG GNNTLNLQQG TAANGTIAAN NYINFNHLDV TSGNWTINGA
STAQDATLSG GVAIINNNAS LGTGTVTGNG GALQAGTTGL NVSNNVSLGA GGLTVQGATG
LTLSGTVSGG GALTKNDGGT LTLSGANSYT GATNLNAGGL VVGNNSALGI GALNVNASAS
LDASTNVTLG NTVNLATGST LTLGGSNALG LTGTISGSGG LTKNGAATTT LSGVNTYTGD
TTINSGTLAL NGAGSLSATG TVNLTGAGAT FDVTGASGAR TIGSLAGAAG TNVTLGANSL
TLNGSGNATY AGTIGGSGSV TLSGTGTQSL TGTNVYTGGT NLNGGNLVVG SNTSLGIGAV
NVNGSSTLDA TTNVTLANGV NLATGTTLTL GGSTDLGLGG VVSGGGGLVK NGAATLTLSG
ANNYAGGTTL NAGGLVLGNG SALGTGALTV GGSATLDTNT NLTVGNAINL TTGNTLTLGG
SNALGLSGAI SGTGSLVKNG AATTTLTGAN TYTGGTTINA GTLAIGAGGS LSSTGTVNLV
NPGAALDISA GSAQSIGALS GAIGTSVSLG ANALTLGGTA SGTFSGTIGG TGSLTLAGTG
TQTLNGANTY TGGTNLNSGS LVLGNNGALG FGALNVGGAA TLDTNATLSV GNAINLGTGA
ALTLGGSNNL ALGGAISGAG SLVKDGAATT TLTGVNTYTG GTTVNGGTLA IGAGGSLAST
GTMNLAGAGA MLDLSAATGG QTLGALSGVT GTNLNLGGNA LTLGGTASGT FSGAIGGTGS
LTLAGTGTQT LNGASTYSGG TNLNSGGLVL GNNGALGFGA LNVGGAATLD TNATLSVGNA
VNLGTGAALT LGGSNSLTLG GAISGAGSLV KDGAATTTLT GANTYTGGTT INAGTLAVSA
GGSLASTGAM NLAGAGATLD LSAATGAQTL GALSGVAGTS LNLGGNALTL GGTASGTFGG
VIGGTGGLTL SGTGTQTLSG ANTYTGGTTI NSGSTLALGA GGSLASTGTV NLTGSGATFN
LSGASGAQTI GALTGAAGTN VNLGGNGLTL SSAGNYAFGG AIGGTGGLTL AGAGTQTLTG
ANTYTGGTTI GGGSTLALGA GGSLAATGAV NLAAAGATFD VSGASGAQTI GALTGAAGTN
VALGANALTL NGSGNNTFGG AIGGTGAVTF AGTGTQTLTG ANTYTGGTTI GGGSTLALGA
GGSLASTGAV NLAGAAATFD VSGATGAQTV GALTGAAGTN VNLGANALTL NGSGSGNGTF
GGTIGGTAGV TVAGTGTQTL TGANTYTGGT TINGGSTLAL GAGGSLASGS AVNLAGTGAT
FDVSGSTGTQ TIGALSGAAG TNVNLGANAL TLNGSGNTTF GGTIGGTGGV TLAGTGTQTL
TGANTYTGGT TINGGSTLAL GAGGSLASTG AVNLAGTGAT FDVSGATGTQ TVGALSGAAG
TNVNLGANAL ALNGSGSSTF GGTIGGAGGV TVASGTQMLT GDNTYTGGTT IAAGGTLQLG
NGGTSGSVAG NVVDNGALIV NQSGNVTIAS VLSGTGSLTQ AGSGRLTLTG TSTLSGPTTV
GAGTLAVNGS LGQSTVTVQN GATLTGTGTI GGLVVQGGAT AAATQPGAAL NVGGNVTFQP
GSTFQVAATP QQSGSLAASG TATLNGGTVQ VLANQSGYQP STTYTILSAS SGVQGAFTQV
SANYAFLTPT LSYDPGHVYL RLVQNGTSLP DVATTPNQRS VATAVAALGA GNPLYDTVLT
TDAPTARRAY GLLGGELQAS LKSMLLIDSR YVRDAVTDRV RQGLAPGSGP LAALSSGGAA
LCGDNTAGVV DPTLPPERRI GSRDGCYGGT PYQPVVWGQA FGGRSRLAGD GNASSINRSM
TGFIAGADMA LNDKWRAGLA AGVTHSSLDN DQSSSAAVNS YYLSLYGGAQ YGALGVRGGA
SYTWYRINSD RYPGFAGFSD HDSAGYNANS AQVFGEVGYA LPVGPVAIEP FAGLAYVNLH
TDGYTESGGA AALRAGGETT HVGFSTLGLR AASQLGSIAS GTFTARGTVG WRHAFGNVRP
SSAFTFANGG TSFQVSGVPI ARDSAVLEAG IDANITKRLT LGLTYSGQYG SGVRDNAILG
NILWKF
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