Gene Bcen2424_4859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4859 
Symbol 
ID4451732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1861168 
End bp1862814 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content67% 
IMG OID639696915 
Productnatural resistance-associated macrophage protein 
Protein accessionYP_838486 
Protein GI116692953 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID[TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGC CATCCAACGT TTCTCCACCG ATCGCCGCCG ACCGCAGCGC CGTGCTCGAC 
GAAGCCCACC TGGGCGACAT CCGCGGTGCG CTCGGCACGA TCGCGCACCA CGATACCGGC
GCACGCGGCA CGTGGTGGGC GCGCCTGCGC ACGCTGCTCG CGATCATCGG CCCGGGCCTG
ATCGTGATGG TCGGCGACAA CGACGCCGGC GCGTTCGGCA CCTACACGCA GGCCGGCCAG
AACTACGGCA CGACGCTGCT GTGGACGCTG CTGCTGCTGG TGCCCGTGCT GTACGTGAAC
CAGGAAATGG TGCTGCGCCT CGGCGCGGTC ACGGGCGTCG GCCATGCGCG GCTGATCTTC
GAACGCTTCG GCAAGTTCTG GGGCGCGTTC AGCGTGATCG ACCTGTTCCT GCTCAACGCG
CTGACCATCG TCACCGAGTT CATCGGCATC ACGTTCGTGC TGGATTTCTT CGGATTGCCG
AAGGTGGCCG GCGTGTGCGT GGCCGCCGCG CTGACGATGG CCGCGGTCAG TACCGGCGAT
TTCCGGCGCT TCGAGCGGTT CGCGATCGGG CTGTGCGTGC TGAGCCTGCT GCTCGTGCCG
GTGCTCGTGT CGATCCACCC GTCCGCCGCG CAGATGACGC GCGACTTCTT CGTGCCGAAC
TGGCCCGCGC ACGCGAAGCT GTCGGACGTG ATGCTGCTCG TGATCGGGAT CGTCGGCACG
ACGGTCGCGC CATGGCAATT GTTCTTCCAG CAGAGCTACG TGATCGACAA GCGCATCACG
CCGCGCTTCA TGAAATATGA AAAGGCCGAC CTGTGGATCG GCATCGCGTT CGTGCTGGTC
GGCGCGGTCG CGATGATCGG CTTCAGCTCG GCGTTGTTCG CCGGCCATCC GGAAGCCGGC
AACTTCACCG ACGCGGGTGG CATCATCGCC GGCCTCGAGA AGTATGCGGG CCGCACGAGC
GCGACGCTGT TCGCGATCGC GCTGCTCGAC GCGTGCATCA TCGGCGCGGC GGCCGTGTCG
CTGTCGACCG CGTACGCGAT CGGCGACGTG TTCAAGATCC GCCACTCGCT GCATCGGGGC
GTGACCGACG CGAAGGGCTT CTATCTCGTC TATTTCGGTA TCGTCGCGGC CGCGGCCACG
CTCGTGCTGA TCCCGGGCAG CCCGCTCGGC CTGCTGACCG AAGCCGTGCA GACGCTGGCC
GGCGTGCTGC TGCCGAGCGC GACGGTGTTC CTGCTCGTGC TGTGCAACGA CCGCCAGGTG
CTCGGGCCCT GGGTCAACTC GACGAAGCTC AACGTGTTCA CGGGCGCGGT GATCTGGGTG
CTGGTGTTGC TGTCGATCAT CCTGACCGCG TCGGTGATGT ATCCGGACAT CAGCGGGGAG
GCGATCGTCG ACGTGCTGGT GGGCGGCACC GTGCTCGCGA TCGCCGGCTA TCTGGCGACG
GTACTGATTC GCCGCAACAA GCGCGTCGTC GAGCCGGGCA TCGATCGCTC GCTGCGCGAC
ACGTGGCGCA TGCCGCCGCT CGATACGCTC GAGCCGCAGA ACATGACGCT CGCGACGCGG
ATCTGGATGG CCGTGTTGCG CGGCTATCTG GTGATCGCGG TCGGGCTCGT GATCGTGAAG
GTGGTGCAGA TGACGCTGCT GAAGTAA
 
Protein sequence
MSTPSNVSPP IAADRSAVLD EAHLGDIRGA LGTIAHHDTG ARGTWWARLR TLLAIIGPGL 
IVMVGDNDAG AFGTYTQAGQ NYGTTLLWTL LLLVPVLYVN QEMVLRLGAV TGVGHARLIF
ERFGKFWGAF SVIDLFLLNA LTIVTEFIGI TFVLDFFGLP KVAGVCVAAA LTMAAVSTGD
FRRFERFAIG LCVLSLLLVP VLVSIHPSAA QMTRDFFVPN WPAHAKLSDV MLLVIGIVGT
TVAPWQLFFQ QSYVIDKRIT PRFMKYEKAD LWIGIAFVLV GAVAMIGFSS ALFAGHPEAG
NFTDAGGIIA GLEKYAGRTS ATLFAIALLD ACIIGAAAVS LSTAYAIGDV FKIRHSLHRG
VTDAKGFYLV YFGIVAAAAT LVLIPGSPLG LLTEAVQTLA GVLLPSATVF LLVLCNDRQV
LGPWVNSTKL NVFTGAVIWV LVLLSIILTA SVMYPDISGE AIVDVLVGGT VLAIAGYLAT
VLIRRNKRVV EPGIDRSLRD TWRMPPLDTL EPQNMTLATR IWMAVLRGYL VIAVGLVIVK
VVQMTLLK