| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4855 |
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| Symbol | |
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| ID | 4451728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 1856261 |
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| End bp | 1856539 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639696911 |
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| Product | HrpO family type III secretion protein |
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| Protein accession | YP_838482 |
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| Protein GI | 116692949 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4794] Type III secretory pathway, component EscS |
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| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.121138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGAGCT CGACGATCCT CGACCTGACG CGCCAGGCGC TGATGCTCGT GCTGCTGCTG
TCGCTGCCGA TCGTGCTGAT CGCGACCGTC ACGGGCCTCG TCGTCGCGAT CCTGCAGGCC
GTCACGCAGG TGCAGGACGC CAACATCGGC ATCGCGGTGC GGCTGATCGC CGTGATGGTC
GCGCTCGTGC TGCTGTCCGG CTGGCTCGGC GGCGAAGTGC TGCGCTTCGC GCAGCAGGCG
CTGGAACGCA TGTTCGTTTC TTCCACAGGA GTTCTTTGA
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| Protein sequence | MTSSTILDLT RQALMLVLLL SLPIVLIATV TGLVVAILQA VTQVQDANIG IAVRLIAVMV
ALVLLSGWLG GEVLRFAQQA LERMFVSSTG VL
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