Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4841 |
Symbol | |
ID | 4451313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1828865 |
End bp | 1829653 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639696897 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_838468 |
Protein GI | 116692935 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00117575 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00476271 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGCGCG CACGCGCCCT GCGAACCGCC GCCGCGTGCG TTGCCGCGCT CGTCGCGCTC GTGCTCGCGT GCGGCCAGCA CGGCGTCGCG CATGCGGCCG GCAGCGCCGC CGGTTTCGCG CAACTCGCTC GCGCGTGCGC GCCGAACGTC GACCCCGATA CGCTTGCCGC GCTCGTGCGC ACCGAGTCGG GCTTCAATCC GTATGCGATC GGCGTAGTCG GCGGACACCT GACTCGCCAG CCAGCCTCGC TCGACGAGGC GCGCGCGACC GCGCGCGAAC TGTCGTCGCG CGGCTTCAGC TACAGCGTCG GCCTCGCGCA GGTCAACGAA CGCAATTTCG CGAAATACGG GCTCGACGAA GCGACGATGT TCGAGCCGTG CCGCAACCTG CAGGCCGGCG GCGCGATCCT GACCGAATGC TTCGCGCGCT CGTCGGGCAC CGGCCGCGCC ACGCAGGCCG CGTTGCGCGC GGCGCTGTCG TGCTACTACA GCGGCAATTT CACGACCGGT TTTTCGAGCG GCTACGTGAG CCGCGTCGTC GCGAGCGCGC AGCGCAATGC GCGCGAAGGC GGCGTCGAAC CGATTCCCGT CGTGAGCGAC ACGACGCCGG CGCGGCAGCG ACGCATGGAC GCGGTCGCAA CCACGCCGCC CGATCGCGCG CGCAGGCTGC CGTTGCCGGC CGCTTCCGCC GACGCACCGT CGTGCCATGC GCGCCCGGTC GTGATGATGT GCCGCGGGCT GCCGGCGAAC CAGGCGAAGC GGCTCTGCGT GCGGTGTCTC GATCAGTGA
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Protein sequence | MMRARALRTA AACVAALVAL VLACGQHGVA HAAGSAAGFA QLARACAPNV DPDTLAALVR TESGFNPYAI GVVGGHLTRQ PASLDEARAT ARELSSRGFS YSVGLAQVNE RNFAKYGLDE ATMFEPCRNL QAGGAILTEC FARSSGTGRA TQAALRAALS CYYSGNFTTG FSSGYVSRVV ASAQRNAREG GVEPIPVVSD TTPARQRRMD AVATTPPDRA RRLPLPAASA DAPSCHARPV VMMCRGLPAN QAKRLCVRCL DQ
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