Gene Bcen2424_4838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4838 
Symbol 
ID4451310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1826255 
End bp1826653 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content60% 
IMG OID639696894 
Productresponse regulator receiver protein 
Protein accessionYP_838465 
Protein GI116692932 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0133671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00111071 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGATTGCA AATACCTGTA CATCGACAAC ATAAAAATCA ACTTCGTGCG CCGCACGATC 
GAAATCGACA ACAAGGTCGT TGACGTTACG CCGCGCGAAT TCGACGTCGT CGAATTCCTG
CTCGACAACA TGAACAAGAT CGTGCCGCGG CAGGCAATCC AGGAAGCCGT GTGGGGCCGT
GAGCTCGGCG TGTCGTCACG CACGCTCGAC ACCCATATCT CGCGAATCCG TTCGAAGCTG
CAACTCGAAC ACGACAAGAA CCTGCGGATC ATCCCGATCT ACGCGGTCGG CTATCGGCTG
GTGCTGTTCG GTGCGGCGAT GACGCACGTC GAGCGCCACG ACGCGGCGCC GGTGCTGCGC
GCGGCGCCCC AAGCCGCGAT GGCCGCCGAC TACGCGTAA
 
Protein sequence
MDCKYLYIDN IKINFVRRTI EIDNKVVDVT PREFDVVEFL LDNMNKIVPR QAIQEAVWGR 
ELGVSSRTLD THISRIRSKL QLEHDKNLRI IPIYAVGYRL VLFGAAMTHV ERHDAAPVLR
AAPQAAMAAD YA