Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4827 |
Symbol | |
ID | 4452099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1814370 |
End bp | 1815767 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639696883 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_838454 |
Protein GI | 116692921 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.115384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.224381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGGCC CGCGGGATGT CGAACGGCTG GTGAGCGCGC TGCCGTTCAT CGCGGTCCGG CACAATCCCG TCGCGCCGTC GCGGCCGCTC GTCTACCTGT CGCAGCAACA CGATGCAGCG CTCGTCGATG TGCTCGCGTC GCGCGGCTGG GACGTATGGC GCGCCAAAAC CGTCGCGGAC GCGCTGAATC TCGTCAAGGC GAACCGTCCG CATGCGGGCA TCGTCGATTT CGGCAGCTTC GCGTCGCCGG ACGTCGCGTC GTTCGAGGCG CTGCTGCGTG ACCCGCGGGT CGGCTGGGTC GCGCTCGCCG ACGGCGAGCG GCTGCGCAAC ATCACGATCG CGCGCCTGAT CCGCCACTGC TGCTTCGACT ACGTGCGCAA TGCAGGGGCC TACACGACGA TCGGCTATCT CGTCGGCCAT GCGTACGGGA TGCTGAAGCT CGCGGACGGC GACCCGGCCG CGGAGGCGCC GCCGCCCGGC GGCACGATGA TCGGCGCGTG CGGCGCGATG CGCCGGCTGT TCGCGACGAT CCGCAAGGTC GCGAACACCG AGGCGACCGT GTTCATCGCC GGCGAATCCG GCACCGGCAA GGAACTGACG GCGGCGGCGA TCCATCGGCA GTCGTCGCGT GCCGACGCAC CGTTCGTCGC CGTGAACTGC GCGGCCATCC CGACGACGCT GCTGCAGGCC GAACTGTTCG GCCACGAGCG CGGCGCGTTC ACCGGCGCGC ACCAGCGCAA GATCGGCCGC ATCGAGGCCG CGCACGGCGG CACGCTGTTT CTCGACGAAA TCGGCGACAT GCCGTTCGAG AGCCAGGCGA GCCTGCTGCG GTTCCTGCAG GAAGGCAAGA TCGAGCGGCT CGGCGGGCAT GCGTCGATTC CGGTCGACGT GCGGATCGTG TCGGCGACCC ACGTCGATCT CGAGGCCGCG ATGCAGGCCG GGCGATTCCG CGCCGACCTG TATTACCGCC TGTGCGTGCT GCGGATCGAC GAGCCGCCGC TGCGCATGCG CGGCCGCGAC ATCATGCTGC TCGCCGACGA CGTGCTGCGG CGCTATCGCG ACGACGGCTC GTACCGGATT CGCGGCTTCA CGCCGTGCGC GATCGAGGCG ATCCACAACT ATCCGTGGCC CGGCAACGTG CGCGAGCTGA TCAACCGGAT CCGCTTCGCG GTCGTGATGA CGAACGGCCC GCTGATCTCG GCCGCCGATC TCGAATTGCG TCCGTACACG TCGCTGCGGC CGCCGACGCT CGCGCAGGCG CGCCGGCAGG CCGAGCGGCA CGCGATCGAG GAAACGCTGC TGCGTCACCG CCACCAGCAT GCGGACGTCG CGGCGGAGCT CGGCATCTCG CGCGCGACGC TCTACCGTCT GATGATCGCG CACGGGCTGC ACAGCTGA
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Protein sequence | MSGPRDVERL VSALPFIAVR HNPVAPSRPL VYLSQQHDAA LVDVLASRGW DVWRAKTVAD ALNLVKANRP HAGIVDFGSF ASPDVASFEA LLRDPRVGWV ALADGERLRN ITIARLIRHC CFDYVRNAGA YTTIGYLVGH AYGMLKLADG DPAAEAPPPG GTMIGACGAM RRLFATIRKV ANTEATVFIA GESGTGKELT AAAIHRQSSR ADAPFVAVNC AAIPTTLLQA ELFGHERGAF TGAHQRKIGR IEAAHGGTLF LDEIGDMPFE SQASLLRFLQ EGKIERLGGH ASIPVDVRIV SATHVDLEAA MQAGRFRADL YYRLCVLRID EPPLRMRGRD IMLLADDVLR RYRDDGSYRI RGFTPCAIEA IHNYPWPGNV RELINRIRFA VVMTNGPLIS AADLELRPYT SLRPPTLAQA RRQAERHAIE ETLLRHRHQH ADVAAELGIS RATLYRLMIA HGLHS
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