Gene Bcen2424_4817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4817 
Symbol 
ID4451566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1803364 
End bp1804452 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID639696873 
Productalcohol dehydrogenase 
Protein accessionYP_838444 
Protein GI116692911 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.562057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.226619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC CCGAAGCCCA GCCGCGCATG ACCGCGGTCG TCTGCCACGG CCCCGAGGAC 
TATCGCGTCG AGCAGGTCGC GAAGCCGAAT CCCGGCGCGA ACGAACTCGT GATCCGCATC
GCCGCGTGCG GGATCTGCGC GAGCGACTGC AAGTGCTACA CCGGCGCCAA GATGTTCTGG
GGCGGCCCCA GCCCGTGGGT GAAGGCGCCG GTCATTCCCG GCCATGAATT CTTCGGCCAT
GTCGAGGCGC TCGGCGACGG CGCGGCCGAG CATTTCGGCG TGGCGCTGGG CGACCGCGTG
ATCGCCGAGC AGATCGTGCC GTGCGGCAAG TGCCGCTACT GCAAGTCGGG CCAGTACTGG
ATGTGCGAGG TACACAATAT CTTCGGTTTC CAGCGCGAGG TCGCCGACGG CGGGATGGCC
GAGTACATGC GCATTCCGCC GACCGCGATC GTTCACAAGA TTCCGCTCGG CGTATCGCTC
GAGGATGCGG CGATCATCGA GCCGCTGTCG TGCGCGATCC ACACGGTGAA CCGCGGCGAC
GTCCAGCTCG ACGACGTCGT CGTGATCGCG GGCGCGGGCC CGCTCGGGCT GATGATGACG
CAGGTCGCGC ACCTGAAGAC GCCGAAGAAA CTCGTCGTGA TCGACCTGAT CGACGAACGG
CTCGAACTCG CGCGCCAGTA CGGCGCCGAC GTGACGATCA ACCCGCAGCG CGACGACGCG
CGCGAGATCG TCCGCGCGCT CACCGACGGC TACGGCTGCG ACGTGTACAT CGAGACGACC
GGCGCGCCGG TCGGCGTGAA CCAGGGGCTC GACCTGATCC GCAAGCTCGG CCGCTTCGTC
GAATTCAGCG TGTTCGGCGA GGATGCGACC GTCGATTGGT CGATCATCGG CGACCGCAAG
GAGCTCGACG TACGCGGTGC GCACCTCGGG CCATACTGCT ATCCGGTCGC GATCGACCTG
CTCGCGCGCG GGCTCGTCAC GTCGAAGGGC ATCGTCACGC ACGGTTTCGC GCTGGAAGAC
TGGGACGATG CGATCCGTGT CGCGAAATCG CCCGAATCGA TCAAGGTGCT GCTGAAGCCG
GCCCGCTGA
 
Protein sequence
MTTPEAQPRM TAVVCHGPED YRVEQVAKPN PGANELVIRI AACGICASDC KCYTGAKMFW 
GGPSPWVKAP VIPGHEFFGH VEALGDGAAE HFGVALGDRV IAEQIVPCGK CRYCKSGQYW
MCEVHNIFGF QREVADGGMA EYMRIPPTAI VHKIPLGVSL EDAAIIEPLS CAIHTVNRGD
VQLDDVVVIA GAGPLGLMMT QVAHLKTPKK LVVIDLIDER LELARQYGAD VTINPQRDDA
REIVRALTDG YGCDVYIETT GAPVGVNQGL DLIRKLGRFV EFSVFGEDAT VDWSIIGDRK
ELDVRGAHLG PYCYPVAIDL LARGLVTSKG IVTHGFALED WDDAIRVAKS PESIKVLLKP
AR