Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4809 |
Symbol | |
ID | 4451558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1797282 |
End bp | 1798037 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639696865 |
Product | Sel1 domain-containing protein |
Protein accession | YP_838436 |
Protein GI | 116692903 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCCG TGTCGCTGAA AGCGCTCGCG TCGGTATCGC CGCGCGAGTT CGCCGACATC CTGGCCGGGC CGCCCGAGCG CGCCGCCGCG TGGGTCGCCG CGGCGGCCGA CCACGGCATC GTCGACGCAC AGGCCGTGTA CGGGCAATAC CTGCTCGACG GGCACGGCGT CGCACGCGAT CCGGCCGCCG CGTTCAACTG GTTCCGGCAT GCCGCGCGGG CCGGCCACCC GATGGCGATG AACATGCTCG GGCGCTGCTA CGAGTTCGGC TGGGGCACGG CCGCCTGCGC GCCGGTCGCC GTGTACTGGT ACCGGCTCGC CGCGCAGGCG GGCCTCGACT GGGGCATGTA CAACTACGCG ACCGCACTCG CCCTCGGCCA CGGCGTCGAC GAGAACCGCG CCGACGCGCT CGACTGGTTC CGCCGCGCGG CCGCGCTCGG CCATGCGAAA TCGATCAACC TGATCGGCGG GTTCTACGAG GACGGCTGGG TCGTAGCGGT CGACACCGAC GCCGCGTTCG ACCACTATCG CCGCGCCGCC ATTGCCGGGG ACTTCCGCGG CCAGTTCAAC TATGCACGGC TGCTCGCCGA GCGCGGACGC ATCGACGAAG CGCTCGCGTG GCTCGCGCGG GTGCCGGCCA CCGCGACACC CGCATTCATC GCGAAGATGC GCGCGTATCT CGTGTCGTCG CCGCTCGACG CTTTTCGTTC GGTGGCCATG CAGCTGGCAC CGCACGCCAT GGAATTCGCA TCATGA
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Protein sequence | MEAVSLKALA SVSPREFADI LAGPPERAAA WVAAAADHGI VDAQAVYGQY LLDGHGVARD PAAAFNWFRH AARAGHPMAM NMLGRCYEFG WGTAACAPVA VYWYRLAAQA GLDWGMYNYA TALALGHGVD ENRADALDWF RRAAALGHAK SINLIGGFYE DGWVVAVDTD AAFDHYRRAA IAGDFRGQFN YARLLAERGR IDEALAWLAR VPATATPAFI AKMRAYLVSS PLDAFRSVAM QLAPHAMEFA S
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