Gene Bcen2424_4785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4785 
Symbol 
ID4453614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1772447 
End bp1773475 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content70% 
IMG OID639696841 
ProductLysR family transcriptional regulator 
Protein accessionYP_838412 
Protein GI116692879 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0237769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC GGTTTCTGGA AACCTTCGTC TGGCTCGCGA AGCTGGAAAA CTTCCGGCTC 
ACGGCCGAGA AACTGCACAC GACGCAGGCC GCCGTGTCGA GCCGCATCGC CTCGCTAGAG
GAAGCGTTCG ACGTGCGCCT GTTCGACCGC AACACGCGCT CGGCCACGCT CACGCCCGCG
GGCCGGCGCA TGCTGGCCTA CGCGGAGCGG ATCGTGCGGC TCGACGGCGA AATGCGGCGC
GACATCGACG CGGCGAGCGA CGCGGGCCTG ATCCGGATCG GCGTGATCGA ATCGATCGTG
CACAGCTGGT TTCCCGCGCT GATGGCGCAA CTGCGCGAGC GCTATCCGCG CCTCGACGTC
GAGATCACGA GCGACACGAC GCTGCATCTG ATTCGCCTGC TCAGCACCGA CGGCGTCGAC
CTGATCCTGC AGACCGACCC GGTGCCGGGC CCGGACTTCA CGAACCTGCC GCTGTGCGAA
TTCCCGGTGC GCTGGGCCGC GAGCCCGCGC CTCGGGCTCG GCGGCCAGCC GCTCGACGTC
GCGCGCCTGG CCGGGTTTCC GATCATCAGT TTCTCGCGCC ACTCGGGGCC GCACGCGACG
ATCGAGCGGC TGTTCGCGGC GGTCGAACGG CCGGCCAGCA TCAACTGCAT CACGTCGGTC
GCCGCGATGA TCCGCCTCGT CGCCGACGGT CTCGGCGTAG CCGCGCTGCC GCCCGCGATC
ATCGGGCGCG AGCTGCAAGA AGGCACGCTC GAACTGCTCG ACGTCGAGCC TGAATTCCCC
GCGCTGCCGC TCGTCGCGAC GTACCGCAGC CAGGGGCTGC CGGTCGCCGC GCGTATCGCG
GAACTCGCGA GCGAAGTGGC ACGCACGATG GCGGCCGCCG CGAACCTCGC GAACCCGGCC
GTCGCCGATC GCGTCGAAGC AACGCCCGCG CGCAAGGCGA CGGAGGCAAA GAACAGCACA
TCGGCAAAGG CGAAGCGCCC GCCGAAAACC GCCGCGCCTG CCGCGAAACG CCGTCCGCGC
CGCTCATAA
 
Protein sequence
MNIRFLETFV WLAKLENFRL TAEKLHTTQA AVSSRIASLE EAFDVRLFDR NTRSATLTPA 
GRRMLAYAER IVRLDGEMRR DIDAASDAGL IRIGVIESIV HSWFPALMAQ LRERYPRLDV
EITSDTTLHL IRLLSTDGVD LILQTDPVPG PDFTNLPLCE FPVRWAASPR LGLGGQPLDV
ARLAGFPIIS FSRHSGPHAT IERLFAAVER PASINCITSV AAMIRLVADG LGVAALPPAI
IGRELQEGTL ELLDVEPEFP ALPLVATYRS QGLPVAARIA ELASEVARTM AAAANLANPA
VADRVEATPA RKATEAKNST SAKAKRPPKT AAPAAKRRPR RS