Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4748 |
Symbol | |
ID | 4452920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1732044 |
End bp | 1732805 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639696804 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_838375 |
Protein GI | 116692842 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00669681 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGGGCA ATGAACAGCA GCGAACGGCC ATCGTCACGG GCGGGTCGAG CGGAATCGGC TTCGCAATCG CGAGCCGGCT GGTGCAGGAC GGGTATCGCG TCGCGATCGT CGGGCGCGAT GCGGCGCGGC TGGAGGCGGC CGTCGCGCGG CTCGGCGGTG CGGCGATCGG GCAGGTGGGC GATCTGAGCG TGCGGCATGA CGCGGAAGCG GTGGTCGCCG CGATCGTTGC AAGGTGGCCG CGTATCGACG TCCTCGTCAA CAACGCGGGA TTGACCGGTC GCGTCGGCGC GGATACGAAG GCGGGCGAAG CGGAGGCCGT GTGGGACGCG GTGCTCCATG CGAACCTGAA AAGCCTGTTC CTGACGACGA TGGCCGTGCT GCCGCACGTG GCCGATCGCG CCGCGCGGAT CGTCAACATC GGTTCGATCG CGGCGCGCGC CGGCAGCCTG TTGCCGGGCG GCCTCGCGTA TGCGGCCGCG AAGGCCGGCG TCGAAGGCTT CACCGTCGCG CTGGCACGCG AACTCGGGCC GCGCGGCGCG ACGGTCAATA CGGTCGCGCC CGGCTATATC GCCGGCACGC GTTTCTTTGG CGACAGCGGG GTCGCGCCGG CCGTCGCGGC AATGATCCGC GTGCAGACGC CGGTTGGCCG CGCCGGACAA CCGGACGACG TCGCGGACGC GGTCGCGTGG CTCGCCGGGC CGCGCGCGTC GTTCGTCACC GGCGCGACGA TCGCGGTGAA CGGCGGCTGG CGCGTCGGGT GA
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Protein sequence | MTGNEQQRTA IVTGGSSGIG FAIASRLVQD GYRVAIVGRD AARLEAAVAR LGGAAIGQVG DLSVRHDAEA VVAAIVARWP RIDVLVNNAG LTGRVGADTK AGEAEAVWDA VLHANLKSLF LTTMAVLPHV ADRAARIVNI GSIAARAGSL LPGGLAYAAA KAGVEGFTVA LARELGPRGA TVNTVAPGYI AGTRFFGDSG VAPAVAAMIR VQTPVGRAGQ PDDVADAVAW LAGPRASFVT GATIAVNGGW RVG
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