| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4745 |
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| Symbol | |
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| ID | 4453554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 1727071 |
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| End bp | 1730244 |
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| Gene Length | 3174 bp |
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| Protein Length | 1057 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639696801 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_838372 |
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| Protein GI | 116692839 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0242644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0121523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCT CCCGCTTCTT CATCGACCGG CCGATCTTCG CGGTCGTGCT GTCGATCGTC
ATCTTCGCGC TCGGCCTGAT CTCGATTCCG ATGCTGCCGG CCGGCGAATA TCCGGAAGTC
GTGCCGCCGA GCGTCGTCGT GCGCGCGACG TACCCGGGCG CGAATCCGAA GGAAATCGCC
GAGTCGGTGG CCGAACCGCT GGAAGAGGCG ATCAACGGCG TCGAAGGCAT CATGTACATG
AAGTCGGTTG CCGGGTCGGA CGGCAGCCTG CAGGTCGTCG TCACGTTCCT GCAGGGCGTC
GATCCCGATA CGGCCGCCGT GCGCGTGCAG AACCGCGTGA GCCAGGCGCT GTCGCGCCTG
CCCGACGAGG TGCGCCAGTA CGGCGTGACC ACGCAGAAGC AGTCGCCCAC GCCGCTGATG
TACGTGAGCC TCTATTCGCC GGACAACAGC CGCGATTCGC TGTACCTGCG CAACTACCTG
ACGCTGCACG TGAAGGACGA ACTGTCGCGG CTCACCGGCA TCGGCGACGT CGGCGTGTAC
GGCTCCGGCG ACTACGCGAT GCGGCTGTGG CTCGACCCGA ACCGGCTCGC GTCGCGCGGG
CTGACCGCGA GCGACGTGAT CGCGGCCGTG CGCGAGCAGA ACGTGCAGGT GTCGGCCGGC
CAGCTCGGCG CGGAGCCGTC GCCGAAGAAA AACGACTTCC TCGTGTCGAT CAACGTGCGC
GGCCGTCTGC GCACGGTGCA GGAATTCAGC GACATCGTGC TGCGCAACGG CGACGACGGC
CAGGTCGTGA AGCTGTCCGA CGTCGCGCGC ATCGAGCTCG GCGCGGGCGA CTACACGCTG
CGCTCGTATT TCAACGACAG GCATTCGGCC GTGGTCGGCA TCTTCCTGTC GCCGGGCGCG
AACGCGCTCG ACGTCGCGAA GGCCGTGTAT GCGAAGCTCG ACGAATTGTC GAAGCGCTTC
CCGCCCGGCG TCGCGTACCG CCCCGTGTGG GACCCGACGG TGTTCGTGCG CGAATCGATC
CGCGCGGTGC AGCACACGCT GATCGAGGCC GTGGTGCTGG TCGTGCTCGT CGTGATCCTG
TTCCTGCAGA CGTGGCGCGC GTCGATCATT CCGCTCGTCG CGGTGCCGGT GTCGGTGGTC
GGCACGTTCG CGTGGCTCTA CCTGCTCGGC TATTCGATCA ACACGCTGAC GCTGTTCGGG
CTCGTGCTCG CGATCGGGAT CGTCGTCGAT GATGCGATCG TCGTGGTCGA AAACGTCGAG
CGCAACATCG CACAGGGGTT GAGCCCGCGC GATGCCGCCC ACCAGGCGAT GCGCGAGGTG
TCCGGGCCGA TCGTCGCGAT CGCGCTGGTG CTGTGCGCGG TGTTCGTGCC GATGGCGTTC
ATGTCGGGCG TCACCGGCCA GTTCTACAAG CAGTTCGCGG TGACGATCGC GATCTCGACG
GTGATCTCCG CGATCAATTC GCTGACGCTG TCGCCCGCGC TCGCCGCGAA GCTGCTGCGT
CCGCACGGCG CGCCGAAGGA TGCGTTGACG CGCGCGCTCG ACCGCGCATT CGGCTGGCTG
TTCCATCCGT TCAACCGCTT CTTCGAGCGC AGTTCCGATC GCTACCACGG CGTCGTCGGG
CGCACGCTGA AGCGGCGCGG CGTGGTGTTC GCCGTCTATG CGGCGCTGCT CGCGGCGACC
GCGCTGCTGT TCAACGCGGT ACCGGGCGGC TTCATCCCGG TGCAGGACAA GCTGTACCTG
TTCGCGGGCG CGAAGCTGCC GGAAGGCGCA TCGCTCGCGC GCACCAGCGC GGTGACCGAG
CAGATGACGA AGATCGCGCT CGGCACCGAC GGCGTCGAAA TGGTGCCGGC GTTCGCCGGG
CTGAATGCGC TGCAGGGCGT GAACACGCCG AACATCACGA ACTCGTACGT GATCCTGAAG
CCGTTCGACC AGCGTCACCG CACTGCCGCG CAGATCAACG CGGACCTGAA CGCGCGCTTC
GCGGCGATCG ATGGCGGCAT CACCTATGCG CTGATGCCGC CGCCGATCCA GGGCCTCGGC
AACGGCTCCG GCTACTCGCT GTACCTGGAG GATCGCGGCG GGCTCGGCTA CGGCGAATTG
CAGAAGGCGC TCACGGCGTT CCAGGCTGCG GTCGCGAAGA CGCCGGGGAT GAGCTATCCC
GTCAGCTCGT ACCAGGCGAA CATCCCGCAG CTCGAGGTGA AGGTCGACCG GCTGAAGGCG
AAGGCGCAGG GCGTCGCGCT GACCGATCTG TTCAACACGT TGCAGGTGTA TCTCGGCTCG
ATGTACGTGA ACGACTTCAA CGTGTTCGGC CGCGTGTATC GCGTGATGGC GCAGGCGGAT
GCCGGCCACC GGCAGACGGC CGCCGACATC GCGAACCTGC GCACGCGCAA CGCGAAGGGC
GAGATGGTGC CGATCGGCTC GATGGTGACG GTCGGGCCCG CGTACGGCCC CGATCCGGTC
GTGCGCTACA ACGGCTATCC GGCCGCCGAC CTGATCGGCG ACGCCGATCC GAAGGCGATG
TCGTCGTCGC AGGCGATCGC GAAGCTGCAG CAGATCGCGA AGGACGTGCT GCCGCCGGGC
ATCACGCTCG AATGGACCGA TCTCAGCTAT CAGCAGGTCA CGCAGAGCAA CGCGGCGATC
GTCGTGTTTC CGCTCGCGGT GATGCTGGTG TTCCTGGTGC TCGCGTCGCT GTACGAGAGC
TGGACGCTGC CGCTCGCGGT GATCCTGATC GTGCCCGTGT GCATGTGCGC GGCGCTGTTC
GGCGTGTGGC TGTCCGGCGG CGACAACAAC GTGTTCGTGC AGGTCGGTCT CGTCGTGCTG
ATGGGGCTCG CATGCAAGAA CGCGATCCTG ATCGTCGAAT TCGCGCGGGA GCTCGAGATC
CAGGGCAAGG GCGTGGTCGA AGCGGCGCTC GAAGCGTGCA AGCTGCGGCT GCGTCCGATC
GTGATGACGT CGGTCGCGTT CATCGCGGGC TCGGTGCCGC TGCTGATCGG CAGCGGCGCG
GGCAGCGAGG TGCGGGCGGC CACCGGCGTC ACCGTGTTCG CGGGGATGCT GGGCGTCACG
CTGTTCGGGC TGTTCCTGAC GCCCGTGTTC TATGTGGCGA TCCGCAAGCT TGCGGGCGGC
ACGCCGGCCG TCTGGAGCGA ACAGCACGGC ACCCTCGAAG GAGAAAACCG ATGA
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| Protein sequence | MDFSRFFIDR PIFAVVLSIV IFALGLISIP MLPAGEYPEV VPPSVVVRAT YPGANPKEIA
ESVAEPLEEA INGVEGIMYM KSVAGSDGSL QVVVTFLQGV DPDTAAVRVQ NRVSQALSRL
PDEVRQYGVT TQKQSPTPLM YVSLYSPDNS RDSLYLRNYL TLHVKDELSR LTGIGDVGVY
GSGDYAMRLW LDPNRLASRG LTASDVIAAV REQNVQVSAG QLGAEPSPKK NDFLVSINVR
GRLRTVQEFS DIVLRNGDDG QVVKLSDVAR IELGAGDYTL RSYFNDRHSA VVGIFLSPGA
NALDVAKAVY AKLDELSKRF PPGVAYRPVW DPTVFVRESI RAVQHTLIEA VVLVVLVVIL
FLQTWRASII PLVAVPVSVV GTFAWLYLLG YSINTLTLFG LVLAIGIVVD DAIVVVENVE
RNIAQGLSPR DAAHQAMREV SGPIVAIALV LCAVFVPMAF MSGVTGQFYK QFAVTIAIST
VISAINSLTL SPALAAKLLR PHGAPKDALT RALDRAFGWL FHPFNRFFER SSDRYHGVVG
RTLKRRGVVF AVYAALLAAT ALLFNAVPGG FIPVQDKLYL FAGAKLPEGA SLARTSAVTE
QMTKIALGTD GVEMVPAFAG LNALQGVNTP NITNSYVILK PFDQRHRTAA QINADLNARF
AAIDGGITYA LMPPPIQGLG NGSGYSLYLE DRGGLGYGEL QKALTAFQAA VAKTPGMSYP
VSSYQANIPQ LEVKVDRLKA KAQGVALTDL FNTLQVYLGS MYVNDFNVFG RVYRVMAQAD
AGHRQTAADI ANLRTRNAKG EMVPIGSMVT VGPAYGPDPV VRYNGYPAAD LIGDADPKAM
SSSQAIAKLQ QIAKDVLPPG ITLEWTDLSY QQVTQSNAAI VVFPLAVMLV FLVLASLYES
WTLPLAVILI VPVCMCAALF GVWLSGGDNN VFVQVGLVVL MGLACKNAIL IVEFARELEI
QGKGVVEAAL EACKLRLRPI VMTSVAFIAG SVPLLIGSGA GSEVRAATGV TVFAGMLGVT
LFGLFLTPVF YVAIRKLAGG TPAVWSEQHG TLEGENR
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