Gene Bcen2424_4740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4740 
Symbol 
ID4453549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1721743 
End bp1722378 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content69% 
IMG OID639696796 
Productisochorismatase hydrolase 
Protein accessionYP_838367 
Protein GI116692834 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00707127 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGCCAAC CGAGAGAGCA TGCCATGCAA CATCCGACCA TCCGTACCCT GGCCGGCGCG 
AGCGCGCCGA CGTCGATCGC CGCCGCCCGC ACCGCGCTGC TGGTGATCGA TTTCCAGAAC
GAATACTTCA GCGGCCGGCT GCCGATTCCG GACGGGCCTC GTGCACTGGG CAATGCGCGG
CGCGTGATCG CGTTCGCCGA CCGCGCGGGC ATTCCGGTGT TTCACGTCCA GCACGTCGGT
ACGGCCGACA GCCCGATCTT CGCCGACGGC AGCGACGGCT TCCGCTTTCA CTCGGACCTG
CAGCCGGCAC CGCATCACGC AGTCGTGAAG AAAACGTCGG TGAGCGTATT CCCGACGACG
GACCTCGATG CGCGGCTGAA GGCGGCCGGC ATCGACACGC TGATCGTCAC CGGCCTGATG
ACGCATGCGT GCGTGGCCGG CGCGGCACGC GATGCGGTGC CGCTCGGCTA TGCGGTGATC
GTCGTCGACG ATGCATGCGC CACGCGCGAC CTCGACGTCG CGGACGGCGG TACGGTGCCG
CACCGCGACC TCCATCGTGC GACGCTGGCC GCGCTGTCGG ACACGTTCGG CGACGTGCTG
ACGACCGAGC AGGTGCTGGC GCTCGGCGTC GTGTGA
 
Protein sequence
MCQPREHAMQ HPTIRTLAGA SAPTSIAAAR TALLVIDFQN EYFSGRLPIP DGPRALGNAR 
RVIAFADRAG IPVFHVQHVG TADSPIFADG SDGFRFHSDL QPAPHHAVVK KTSVSVFPTT
DLDARLKAAG IDTLIVTGLM THACVAGAAR DAVPLGYAVI VVDDACATRD LDVADGGTVP
HRDLHRATLA ALSDTFGDVL TTEQVLALGV V