| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4720 |
|---|
| Symbol | |
|---|
| ID | 4453529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 1704871 |
|---|
| End bp | 1705920 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639696776 |
|---|
| Product | multidrug resistance protein MdtN |
|---|
| Protein accession | YP_838347 |
|---|
| Protein GI | 116692814 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00623543 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCCG CCGGCATCGC CCGCCCCTCC GTCAAAGGCC GCGTGATCGC GCTCGCGATC
GTCGCGCTCG GCATCGCGGC GCTCGCGTAC GCGTACCACC GCACGACCGC CTACCCGTCC
ACCGACGACG CGTCGATCGA CGCGGACGTC GTGCACGTCG CGTCGCCGGT CGGCGGTCGC
ATCGTGCAGC TCGCCGTGCA TGAAAACCAG CGCGTCGCGA AAGGCGACCT GCTGTACGTG
ATCGATCCCG TGCCGTACCG GCTGACCGTC GCGCAGGCGC AGGCCGACCT CGAACTCGCG
CGCGCGTCGC TCGACACGCG CCGCCGTTCG CTGATCGGCG AGCGCTCGAA TGCGTCCGTC
GCCGCCGAGC AGGTCAAGCG CGCGACGCAG AACTACGATC TCGCGACGCG CGACGTGAAC
CGGCTCGCGC CGCTCGCCGC GCAGGGTTAC GTCAGCGCGC AGCAGTTCGA CCAGGCGAAG
GTGCGCCAGC GCGACGCGTC CGTGTCGCTC GCGCAGGCGC AGGAGCAGCA GCGCGCGTCC
GCACAGACGA TCGGCGACGA CGCGGACGCG ATCGCGACGC TGCATGCGCG CGAAGCCGCG
CTGGCCCGCG CGCAGCATGC GCTCGACGAT ACGGTCGTGC GCGCGCCGCA CGACGGGCTC
GTGACCGGCC TGAGCGTGCT GCCCGGCGAA ACCCTCGCGC CGAACCAGTC GATCTTCACG
CTGATCGATG CGAGCGAATG GTTCGCGGTC GGCAATTTCC GCGAGACGTC GCTCAATCGC
ATCGCGGTCG GCGACTGCGC GACCGTCTAC TCGATGATCG ACCGCAGCCG CCCGCTGACG
GGCAAGGTCG TCGGCATTGG CGCCGGCATC GCGGACAGCG CGCGCATCAA CCTGCCGCGC
TCGCTGCCGA TCGTGCAGAA CTCGGTGAAC TGGGTGCACG TCGCGCAGCG CTTCCCCGTG
CGCGTGAAGC TCGACGAACC CGACGGCAAG CTCGTGCGTG TCGGCGCGAG CGCGATCGTC
GAGGTCCGGC ATGGCTCAGC CTGCCGCTGA
|
|---|
| Protein sequence | MKAAGIARPS VKGRVIALAI VALGIAALAY AYHRTTAYPS TDDASIDADV VHVASPVGGR
IVQLAVHENQ RVAKGDLLYV IDPVPYRLTV AQAQADLELA RASLDTRRRS LIGERSNASV
AAEQVKRATQ NYDLATRDVN RLAPLAAQGY VSAQQFDQAK VRQRDASVSL AQAQEQQRAS
AQTIGDDADA IATLHAREAA LARAQHALDD TVVRAPHDGL VTGLSVLPGE TLAPNQSIFT
LIDASEWFAV GNFRETSLNR IAVGDCATVY SMIDRSRPLT GKVVGIGAGI ADSARINLPR
SLPIVQNSVN WVHVAQRFPV RVKLDEPDGK LVRVGASAIV EVRHGSACR
|
|---|
| |