| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4658 |
|---|
| Symbol | |
|---|
| ID | 4451298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 1641683 |
|---|
| End bp | 1642777 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639696714 |
|---|
| Product | TrkA domain-containing protein |
|---|
| Protein accession | YP_838285 |
|---|
| Protein GI | 116692752 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.677832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCACGC CATCCGATCA GCGCCGCTCG TTGCGCATGC GCCTGCGTCG CGCCCGCAAT
CCGTGGCAGG CGCCGCGTGC GCGCACGCTG TTCACGCGCC CCGCGACGTC GCCGCTGCGC
ACGCTGCTGT TCCGTCTCGG CGCGGTCGTG CTGTTGTGCA CGCTGGCGTT CCTCGTGCTG
TATCTCGATC GCGACGGCCT GCGCGATTCG ACCAAGAGCA CGCCGATGAC CGTGGCCGAT
CTCGTGTACT TCACGATGGT CACGGTCGCG ACGGTCGGCT ACGGCGATAT CGTGCCCGTC
ACGGCGCGGG CGCGCCTGCT CGATGCGTTC TTCATCGTGC CGATCCGCAT CGGCATCTGG
TTCATTTTCC TGGGCACGGC GTATCAGTTC GTGATCCAGC GCGTCATCGA GGAATTCCGC
ATGAAACGCC TGCAGAAGCA ACTGTCCGAT CACATCGTCG TGTGCGGTTA TGGCCTGTCG
GGATCGATCG CGGTGCGCGA GTTGCTGGAG AGCGGCGTCG ATCCGGCGAC GATCATCGTG
ATCGATTCGC AGCAGCAGGC CCTCGAGGCG GCGACGTCGC TCGGCGTGAC GGGGTTGCTC
GGCGATCCGG CCCATGAGGA TCTGCTGCAG CAGGCGCAGG TGCGCGCGGC GAAGGCCGTG
ATCATTTCGG TGACCGACGA TCCGACCGCG ATCCTGCTGA CGCTGTCGGT GCGCAGCATC
GCGCCCGATA CGAAGATCGT CGTGCGGATT CAGGAGAACC TGTACCAGCG GCAACTGCGG
CAGGCCGGCG CGGACGTGAT CGTATCGTCG ACGAAGATCG GTGCGTTGTT GCTGGCGGAT
GCGGTCCACA GCCGCTACAT CGTGCCGTTC GTGAACGACA TGCTGTCGAC GCGCGGGCGC
GCGACGCTGC TGGAGCGCGA GGCATTGCCG CATGAGATCG GCTGCCTGAC GAACGTCGTG
CCGGGCGCGA TCGTGGTCGG GCTCGATCGC TGCGGGAAGA TCTATTCGTT TTACGAGGAT
GCGCCGTGCA GGATCGAGGC GGGCGATACG CTGGTGGTGA TTCAGTCGGC GCGGATTCCC
GATCCGGATG CGTGA
|
|---|
| Protein sequence | MATPSDQRRS LRMRLRRARN PWQAPRARTL FTRPATSPLR TLLFRLGAVV LLCTLAFLVL
YLDRDGLRDS TKSTPMTVAD LVYFTMVTVA TVGYGDIVPV TARARLLDAF FIVPIRIGIW
FIFLGTAYQF VIQRVIEEFR MKRLQKQLSD HIVVCGYGLS GSIAVRELLE SGVDPATIIV
IDSQQQALEA ATSLGVTGLL GDPAHEDLLQ QAQVRAAKAV IISVTDDPTA ILLTLSVRSI
APDTKIVVRI QENLYQRQLR QAGADVIVSS TKIGALLLAD AVHSRYIVPF VNDMLSTRGR
ATLLEREALP HEIGCLTNVV PGAIVVGLDR CGKIYSFYED APCRIEAGDT LVVIQSARIP
DPDA
|
|---|
| |