| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4641 |
|---|
| Symbol | |
|---|
| ID | 4452675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 1620898 |
|---|
| End bp | 1622427 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639696697 |
|---|
| Product | mannitol dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_838268 |
|---|
| Protein GI | 116692735 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA ACGCATCCCC TCCGGCGCGC GAAGACGACA CGCGCCATCC GCTCGCCAAT
GCAACCCTCG GACGCGCGGC GCCGCACGTC GCCGTTCCTG CCTACGACCG CCATCGCCTG
ACGGCAGGCA TCGCGCATAT CGGCGTCGGC AACTTCCATC GCGCCCATCA GGCGCGCTAC
ATCGATCATG TGCTGCATCT GCCCGGTCAC GAAAAATGGG CAATATGCGG AATCGGACTG
GGTAGCGGCC CGGCCTCGGT CGCCAAGGCC GACGCGCTTC GCGCGCAGGA TTGCCTCTAT
ACGCTGACGG AGTTCTCGAG CGACGGCACG ACGGTCGTGC GCGTCATCGG TGCAATGATC
GAGTATCTGC ACGCACCGGC CGACCCGGAA GCCGTACTGA CCCGGCTTGC CGATCCGGCG
ATCCGGATCG TATCGCTGAC CATCACGGAA GGCGGTTACA ACCTCGACGA GACGACCGGC
GCATTCCGGT TCGATACGCC CGACGTCGCA CACGATCTGC TGGGCGGACC GCCCCGTACC
GCGTTCGGGT TCATCGTCGA AGCGCTCAGA CGGCGTCGAG CCGCCAACGT ACTGCCCTTC
ACCGTGATGT CCTGCGACAA TCTGCGCGGT AACGGGGATA CCGCGCGGCG CGCGGTGCTC
GATTTCGCAC GGGCGACCGA CGTCGATCTC GCCGCCTGGA TCGAGCGTTA CGTCGCGTTC
CCGAACAGCA TGGTCGACCG GATCGCGCCG CAGGTGACGG ACGCGATCCG CCTGCGCGCC
AACCGGTTGT CAGGCTTCGA CGACACGGCG CCCGTCGTTG CCGAAACGTT CTCGCAATGG
GTGGTCGAGG ACAGCTTCAG CGCCGGCCGC CCGGCATTCG ACGCAGCGGG CGTCGAATTG
CGTGACGACG TCCATGCGTA CGAGTCCATG AAGGGGCGCA TGCTGAACGC TTCCCACATG
TTGCTCGCTT ACCCGGCGAT TCTGCTCGGA CATCGCTTCG TCCATGACGC CATGGCCGAT
CGCGATCTCG CGGCGCTGCT CGACATCTTC CTTACCCGGG ACGTCGGCTC GATCCTCACG
CTACCGCATG GCGTGTCCGC ACGCGCCTAT GCCCGCGATA CGCTCGCGCG CTTCCGCAAC
GCCGCACTGG GCGATCAGTT GCTGCGCGTC GCGCACGACG GCGCGTCGAA GATCCCGGTG
TTTCATGAAA AGACCATCGG GGCATTGATC GCGCGTCACG GCGACATGCG CCGTGAAGCC
CTGCTGCTGG CCTGCTTCCA GCATTACCTG AAGGGTGTCG ACGATCTCGG CAACGCGTTC
GCAGTCAGTG AGCCGCAATT CGAGGCAGCG GATCTCGAGC GCGTGCGAAG CGGCGCGCCA
CTCGCGATCC TCGATTCAAA GCCGTTCGCC CCGCTCGGGC TCGCTTCCAA CCCGGGGTTC
GTCGAGCTAT TCCGCACGAT GCAGGCAGCC GTGGCGACAC GCAGGACGCG CGACGCCATC
CGGCTGGCGC TCGATGCTTC AGATACCTGA
|
|---|
| Protein sequence | MNDNASPPAR EDDTRHPLAN ATLGRAAPHV AVPAYDRHRL TAGIAHIGVG NFHRAHQARY
IDHVLHLPGH EKWAICGIGL GSGPASVAKA DALRAQDCLY TLTEFSSDGT TVVRVIGAMI
EYLHAPADPE AVLTRLADPA IRIVSLTITE GGYNLDETTG AFRFDTPDVA HDLLGGPPRT
AFGFIVEALR RRRAANVLPF TVMSCDNLRG NGDTARRAVL DFARATDVDL AAWIERYVAF
PNSMVDRIAP QVTDAIRLRA NRLSGFDDTA PVVAETFSQW VVEDSFSAGR PAFDAAGVEL
RDDVHAYESM KGRMLNASHM LLAYPAILLG HRFVHDAMAD RDLAALLDIF LTRDVGSILT
LPHGVSARAY ARDTLARFRN AALGDQLLRV AHDGASKIPV FHEKTIGALI ARHGDMRREA
LLLACFQHYL KGVDDLGNAF AVSEPQFEAA DLERVRSGAP LAILDSKPFA PLGLASNPGF
VELFRTMQAA VATRRTRDAI RLALDASDT
|
|---|
| |