| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4620 |
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| Symbol | |
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| ID | 4451869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 1597895 |
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| End bp | 1599124 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639696676 |
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| Product | porin |
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| Protein accession | YP_838247 |
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| Protein GI | 116692714 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.382092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCCC GGGCCGGCGA TGCGAGCAGA CCGATCCACT CCAACGAAAC CATCATGAAG
AAATATCTGG CAATTCCGGC GGCGGTCGCC TGCCTGCTGG CGAGCGCGGC GCATGCGCAG
AGCAGCGTGA CGCTGTACGG CACGATCGAC GCGGGCCTGG ACTACATCAG CAACCAGAAA
TCGGCCGCGG GCGCGGGGCC CGTCTACGGT GTCCAGAGCG GCAACGTCAG CACGTCGCGC
TGGGGGCTGC GCGGCAACGA GGATCTCGGC GGCGGGCTGG CCGCCGTGTT CACCCTCGAG
AACGGCTTCA ACGTCGCGAA CGGCAAGCTT GGCAACGGTG GCGACGAATT CGGCCGCCAG
GCGTGGGTGG GCCTCGCGAG CCGCCAGTGG GGTACGGTGA CGCTCGGCCG CCAGTACGAT
TTCCTGGTCG ACTTCGTCGC GCCGCTGTCG GCGACGGGGT CGGGATTCGG CGGCAACCTC
GTCGATCATC CGTACGACAA CGACAACCTC GCCAACGACA CGCGGATGAA CAACGCGGTG
AAGTTCCGCA GTGCGAACTA CGGCGGCTTC ACGTTCGGCG GTGCGTACGG CTTCAGCAAT
CAAGGCGGCG GATTCAGCAA CGACAACGCG TACAGCGTCG GTGCGCAGTA CGTGAACGGC
CCGGTCGACC TCGCCGTCGC GTACCTGCAG TCGAACCAGC CGGGCGGCGT CGACGCGCCG
CAGAACACCG GCGGGTCGCT GAGCAGCGCC GATGGCGATG CGATGCTGAC CGGCGGCCGC
TGGCGCACGT TCGGCGCCGG CGCGCACTAT GCGTTCGACC ATGCCGCGAT CGGCTTCGTC
TACACCAGAA CGATCCTGAA CGACCCGCGC GAGCTGTCGC AGGGCGGCGC GTACGGCCGC
GTGAACGGCC AGTTGCTGAC CTTCAGCAAC TACGAACTGA ACGGGCGCTA CTTCCTCACG
CCGGCCCTCT CGCTGGGCGG CGCCTATACG TTCACGCAGG GGCGCTTCGA CGATGCGGGC
CGCGGCATCG CGCCGAAGTG GAACCAGTTC ATGCTGCAGG CCGACTATGC GCTGTCGCGT
CGCACCGACC TCTATCTGGA AGGCGTGTAT CAGCGCGTGA CGGGTGCGGA CGGCGTTGCG
GTGCTCGGCC ACGCGGGGAT CTTCAACCTG GCCGCGTCAG GCAACGATCG TCAGGCCGTC
GTCGCGGCCG GTATCCGTCA CAAGTTCTGA
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| Protein sequence | MLPRAGDASR PIHSNETIMK KYLAIPAAVA CLLASAAHAQ SSVTLYGTID AGLDYISNQK
SAAGAGPVYG VQSGNVSTSR WGLRGNEDLG GGLAAVFTLE NGFNVANGKL GNGGDEFGRQ
AWVGLASRQW GTVTLGRQYD FLVDFVAPLS ATGSGFGGNL VDHPYDNDNL ANDTRMNNAV
KFRSANYGGF TFGGAYGFSN QGGGFSNDNA YSVGAQYVNG PVDLAVAYLQ SNQPGGVDAP
QNTGGSLSSA DGDAMLTGGR WRTFGAGAHY AFDHAAIGFV YTRTILNDPR ELSQGGAYGR
VNGQLLTFSN YELNGRYFLT PALSLGGAYT FTQGRFDDAG RGIAPKWNQF MLQADYALSR
RTDLYLEGVY QRVTGADGVA VLGHAGIFNL AASGNDRQAV VAAGIRHKF
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