| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4615 |
|---|
| Symbol | |
|---|
| ID | 4453854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 1590128 |
|---|
| End bp | 1591051 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639696671 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_838242 |
|---|
| Protein GI | 116692709 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0591659 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAC TGCAAGCGAT GCGTGTCTTC ACGCGCGTGG TCGAGTTATC GAGCTTCAGC
CTCGCCGCAC GTCAGCTCGG CATGTCGGCC GCCGCGGTCA CGCGCAGCGT CGGCATGCTC
GAGGCCCATC TGAACATGCG CCTGTTGAAC CGGACCACGC GCAGCCTGTC GCTCACCGAG
ACAGGCCGCG AATATCTCGA CGGCTGCCGC ACGATCATCG AGAAGCTCGA CGAGATCGAA
TCGAATCTCG CGCAGGTCAA TCGCGACCCG CACGGTACGC TGCGCATCGC CGCGTCGGCA
ACCTCGGTTG CGGCCGGGCT TGGCGCGCTG CTGTCCACGT ATCGCATCGA GCATCCGCGC
GTGCGCTTCG ACGTGACGAC CTTCGATATC CAGGTCGACA TGGTGGAAGG CGGCTACGAC
GTGTGCTTCT GTGACGATCA CCGCCTGGTC AACTCGACCT TCGTGTCGCG CACCTTGACG
AGCGTGCGCG ACGTGATCGT CGCCTCTCCC GGCTACCTCG CGCGCCACGG CACGCCGGTC
GAGCCGGTCG AACTGAATAC GCACTGCCTG CTGACGGTGT CGAACGGCGC CGCGCGCAAC
TGGGAGTTCT CGGATGTCGA CGGTTCGTCG CGCATCTATA CCGGCAATGC GCTGGCGTCG
ACCAGCAACA CGATGGTGCG GATCGCGGCA CTCAATCACA TGGGCATCGC GCAATTGCCG
CATCCGCTCG TGGCCGACGA TCTCGCGAGC GGCACCCTGG TGCCGATTCT CGAACGCTAC
GACGTGAACG GCGGCCCGCG CCGCGTATCG ATCCTCTACC CGAGCCGCAA TTATCTGTCC
ACGAAAGTGC GCAGTTTCAT CGACTACGTG GTCGATCACT ATCGCACGCC CGAGCGCACC
GCCATGCAGC TTGCCGCGGC CTGA
|
|---|
| Protein sequence | MNQLQAMRVF TRVVELSSFS LAARQLGMSA AAVTRSVGML EAHLNMRLLN RTTRSLSLTE
TGREYLDGCR TIIEKLDEIE SNLAQVNRDP HGTLRIAASA TSVAAGLGAL LSTYRIEHPR
VRFDVTTFDI QVDMVEGGYD VCFCDDHRLV NSTFVSRTLT SVRDVIVASP GYLARHGTPV
EPVELNTHCL LTVSNGAARN WEFSDVDGSS RIYTGNALAS TSNTMVRIAA LNHMGIAQLP
HPLVADDLAS GTLVPILERY DVNGGPRRVS ILYPSRNYLS TKVRSFIDYV VDHYRTPERT
AMQLAAA
|
|---|
| |