Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4610 |
Symbol | |
ID | 4453849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1584794 |
End bp | 1586395 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639696666 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_838237 |
Protein GI | 116692704 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0233056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTT CCTATGACGC GGACGTCATC GTCATCGGCG CGGGCATCCT GGGCGGCGCC GTCGCGCAGT CGCTGACGCA GCAGCGCAAG TCCGTCATCG TGATCGAGGC GGGGCCGGAG GTGAAGCGGG CCGAGCTCGT CCGCGCGTTC CGCAATTACG GCAACAAGTC GGATTACAAC GGCCCGTACC CGGATCTGCC GTGGGCGCCG AAGTCGTCCA CCGGCCGCTA TTCCGATCGC TACATCGACA GCGTCGGCCC GGTGCTGCAG AAGCCGTCGT TCCTGCGGCT CGTCGGCGGC ACGACCTGGC ACTGGGGCGG CGCGACGTGG CGCATGCTGC CGAACGATTT CCGGCTGCAC AGCCTGTATG GGCAGGGGCG CGACTGGCCG ATCGGTTATG ACGAGCTCGA GCCGTGGTAC CAGCTCGCGG AGGAGCAGAT CGGCGTGTCG GGCTCGGACA CCGACGACCA GAGCGGGCAA GGCGGGGCGC CGTTCCCGCC GCGCTCGAAG CCGTACCCGA TGCGGCAGCA GCCGTGGTCG TACCTGACGC AGCGGGTCGC GGAAAAGGTC GCGACGATCG GCCATCGTTT CGTCGACGAA CCCAACGCGC GCGCGACGCG ACCCTACGAG GGCCGGCCGA CCTGCGCCGG CAACAACAAC TGCGCGCCGA TCTGCCCGAT CGGCGCGCAA TTCTCCGGCG ATCGCCCGGT GCTGCGCGCC GTCGCGCAGG GTGCGCGGCT GCTGACGAAT GCGGTCGTCT ACAAGATCGA GCGCGGCGAG GGGCGCAAGA TCGCCGCGAT CCACTACATG ACGCCGGATG GCAAAAGCAC GCGCCTGACC GCGCGGACCT TCGTGCTCGC GGCGCACGGT GTCGAGATTC CGAAGCTGCT GCTGATGTCG GACGTTGCGA ACACGTCGGG CCAGGTCGGC CGCAACATGA TGGGGCACAC CGGCCGCGCG ATCGCGATGC TCGCGCGCGA ACCGGTGTGG GCCGGGCGAG GCCCGACCCA GCAGGGCAGC ATCAACACGC GGCGCGACGG CGCGTTTCGT CGCGAACACG GCGCGATCCG GCATTTCCTC GACAACACCG TGCCGAACGA GATCGTCACG CGGCGGCTGA TCGCGCAAGG TGTCGTCGGC GACGCGCTCG ATGCGCGGAT CCGCCACGAC GCGGCGCGCT ACCTGAAGAT CGCGAGCTAC GTCGAGATCC TGCCCGACCC GCGTAACCGT GTGACGCTCA GCGATCGCAA GGATGCACTC GGGCTGCCGA CGCCGCGTAC CGACTATGAC GTGTACGACT ATTCGTTGCG AGCGGCGTCG CAAGTGCTCG ACGATTACCG CGACTTCCAG CAGGTGTTCG GTGCGACCGA GATCGTGAAC GACATCCATG CGTGGGTGCC GAGTTCTCAC ATCATGGGCA CGACGATCAT GGGCAACGAT CCGGCCGATT CGGTCGTCGA TCGCGATTGC CGAACGCACG ATCACCCGAA CCTGTTCATC GCGAGTACGG CCGTGCACCC GAGTTCGTCG GTGGTCAATC CGACGCTGAC CGGGTATGCG CTGGCGCTCA GGATGGCGAA GACGATTGGA GCGGAAGTCT GA
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Protein sequence | MSSSYDADVI VIGAGILGGA VAQSLTQQRK SVIVIEAGPE VKRAELVRAF RNYGNKSDYN GPYPDLPWAP KSSTGRYSDR YIDSVGPVLQ KPSFLRLVGG TTWHWGGATW RMLPNDFRLH SLYGQGRDWP IGYDELEPWY QLAEEQIGVS GSDTDDQSGQ GGAPFPPRSK PYPMRQQPWS YLTQRVAEKV ATIGHRFVDE PNARATRPYE GRPTCAGNNN CAPICPIGAQ FSGDRPVLRA VAQGARLLTN AVVYKIERGE GRKIAAIHYM TPDGKSTRLT ARTFVLAAHG VEIPKLLLMS DVANTSGQVG RNMMGHTGRA IAMLAREPVW AGRGPTQQGS INTRRDGAFR REHGAIRHFL DNTVPNEIVT RRLIAQGVVG DALDARIRHD AARYLKIASY VEILPDPRNR VTLSDRKDAL GLPTPRTDYD VYDYSLRAAS QVLDDYRDFQ QVFGATEIVN DIHAWVPSSH IMGTTIMGND PADSVVDRDC RTHDHPNLFI ASTAVHPSSS VVNPTLTGYA LALRMAKTIG AEV
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