Gene Bcen2424_4610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4610 
Symbol 
ID4453849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1584794 
End bp1586395 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content67% 
IMG OID639696666 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_838237 
Protein GI116692704 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0233056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTT CCTATGACGC GGACGTCATC GTCATCGGCG CGGGCATCCT GGGCGGCGCC 
GTCGCGCAGT CGCTGACGCA GCAGCGCAAG TCCGTCATCG TGATCGAGGC GGGGCCGGAG
GTGAAGCGGG CCGAGCTCGT CCGCGCGTTC CGCAATTACG GCAACAAGTC GGATTACAAC
GGCCCGTACC CGGATCTGCC GTGGGCGCCG AAGTCGTCCA CCGGCCGCTA TTCCGATCGC
TACATCGACA GCGTCGGCCC GGTGCTGCAG AAGCCGTCGT TCCTGCGGCT CGTCGGCGGC
ACGACCTGGC ACTGGGGCGG CGCGACGTGG CGCATGCTGC CGAACGATTT CCGGCTGCAC
AGCCTGTATG GGCAGGGGCG CGACTGGCCG ATCGGTTATG ACGAGCTCGA GCCGTGGTAC
CAGCTCGCGG AGGAGCAGAT CGGCGTGTCG GGCTCGGACA CCGACGACCA GAGCGGGCAA
GGCGGGGCGC CGTTCCCGCC GCGCTCGAAG CCGTACCCGA TGCGGCAGCA GCCGTGGTCG
TACCTGACGC AGCGGGTCGC GGAAAAGGTC GCGACGATCG GCCATCGTTT CGTCGACGAA
CCCAACGCGC GCGCGACGCG ACCCTACGAG GGCCGGCCGA CCTGCGCCGG CAACAACAAC
TGCGCGCCGA TCTGCCCGAT CGGCGCGCAA TTCTCCGGCG ATCGCCCGGT GCTGCGCGCC
GTCGCGCAGG GTGCGCGGCT GCTGACGAAT GCGGTCGTCT ACAAGATCGA GCGCGGCGAG
GGGCGCAAGA TCGCCGCGAT CCACTACATG ACGCCGGATG GCAAAAGCAC GCGCCTGACC
GCGCGGACCT TCGTGCTCGC GGCGCACGGT GTCGAGATTC CGAAGCTGCT GCTGATGTCG
GACGTTGCGA ACACGTCGGG CCAGGTCGGC CGCAACATGA TGGGGCACAC CGGCCGCGCG
ATCGCGATGC TCGCGCGCGA ACCGGTGTGG GCCGGGCGAG GCCCGACCCA GCAGGGCAGC
ATCAACACGC GGCGCGACGG CGCGTTTCGT CGCGAACACG GCGCGATCCG GCATTTCCTC
GACAACACCG TGCCGAACGA GATCGTCACG CGGCGGCTGA TCGCGCAAGG TGTCGTCGGC
GACGCGCTCG ATGCGCGGAT CCGCCACGAC GCGGCGCGCT ACCTGAAGAT CGCGAGCTAC
GTCGAGATCC TGCCCGACCC GCGTAACCGT GTGACGCTCA GCGATCGCAA GGATGCACTC
GGGCTGCCGA CGCCGCGTAC CGACTATGAC GTGTACGACT ATTCGTTGCG AGCGGCGTCG
CAAGTGCTCG ACGATTACCG CGACTTCCAG CAGGTGTTCG GTGCGACCGA GATCGTGAAC
GACATCCATG CGTGGGTGCC GAGTTCTCAC ATCATGGGCA CGACGATCAT GGGCAACGAT
CCGGCCGATT CGGTCGTCGA TCGCGATTGC CGAACGCACG ATCACCCGAA CCTGTTCATC
GCGAGTACGG CCGTGCACCC GAGTTCGTCG GTGGTCAATC CGACGCTGAC CGGGTATGCG
CTGGCGCTCA GGATGGCGAA GACGATTGGA GCGGAAGTCT GA
 
Protein sequence
MSSSYDADVI VIGAGILGGA VAQSLTQQRK SVIVIEAGPE VKRAELVRAF RNYGNKSDYN 
GPYPDLPWAP KSSTGRYSDR YIDSVGPVLQ KPSFLRLVGG TTWHWGGATW RMLPNDFRLH
SLYGQGRDWP IGYDELEPWY QLAEEQIGVS GSDTDDQSGQ GGAPFPPRSK PYPMRQQPWS
YLTQRVAEKV ATIGHRFVDE PNARATRPYE GRPTCAGNNN CAPICPIGAQ FSGDRPVLRA
VAQGARLLTN AVVYKIERGE GRKIAAIHYM TPDGKSTRLT ARTFVLAAHG VEIPKLLLMS
DVANTSGQVG RNMMGHTGRA IAMLAREPVW AGRGPTQQGS INTRRDGAFR REHGAIRHFL
DNTVPNEIVT RRLIAQGVVG DALDARIRHD AARYLKIASY VEILPDPRNR VTLSDRKDAL
GLPTPRTDYD VYDYSLRAAS QVLDDYRDFQ QVFGATEIVN DIHAWVPSSH IMGTTIMGND
PADSVVDRDC RTHDHPNLFI ASTAVHPSSS VVNPTLTGYA LALRMAKTIG AEV