| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4603 |
|---|
| Symbol | |
|---|
| ID | 4453842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 1575855 |
|---|
| End bp | 1578026 |
|---|
| Gene Length | 2172 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639696659 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_838230 |
|---|
| Protein GI | 116692697 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00222585 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0280376 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCGC GCAGCAGATT CGCGCTCGGC GCCGCGCTCA GCGCCCTTTC CGTCGTGTTC
GTCAGCGCGT GCGGCGGCAA CGACGTGACC GACACGCCGC CATCGCCCCC CTCGTCGACC
ACGCCCACCA CGCCCACGCT CGCGTCGAAC TCGTTGCAGG CGCTCGTCTA TGGCGCGCCC
GACACCAGCG TGCCGGCCGG CACGAACATC CCGGTCACGA TGATGGGCCA GATGCGCGCG
CTGTTCGACC TGATCCGGAA ATCGCCCGAT TTCACGCAGG TCGTGATGGA TCTCGGCGAC
GGCACGCCCG TCCACGTGCT CGACACGAAC ACCGGCGACA AATTCCTGCC CGGCAAGCTC
GCGCTCGGCC TGTCGTACAT CCTGATCGAC ATGAAGTCGA AGAACGACCC GCAATACGCG
AGCTACCTCG CGACGTACCA GACGATCACG ACCGCGATGA TGGCGCAGTC GGGCAGCAAC
TACACGTATG CGAACACGTC GTGGGGCGAG TACTACTACC TCGTCGCGCT GAACAACCTG
AAGGCGCACG GGATGCTCAA CGAAGTCTTC AGCGACGCGA TGCTCGCGAC GCTGCAGCAG
CGGCTCACCT TCTGCGACAT GTTCGGCCCG GATGCGAGCG GCAAGACCAG TACATGCCCG
GCGGCCGGCA CGCCGATCGA CATCGCGTCG CTCAACACCG CTCAGAACTA CTACGCGGTG
TCCTACGGCA TTGCCGGGCT GCGCCAGAAG CTCGGCTGGA GCAGCCCGTC GTTCGCATCG
AAGACCGATC CGGCGGTCGC CGCGATGAGC GCGCGCGACG CGCTGCTGTA CACGCTGACG
AACCACATCC GCAACGACTC GTCGGGCGGG TTCTCCGACG AAGCATCGAA CACGCACACG
ACCTATTACG ACCAGGCGCG CTTCGACCGC TACAGCACGC TGCTGATCGG CGAAGTGGTC
GAGCGCACGT TCGAGATGGG CAACGAAGCA AACCTCACGC CGGAGCTGAA GGGCTATCTG
CGCAAGTCGG TCGACCTGAT CCTGCCGCAG CTGAACGCCA ACGGCCAGGG CTTCAACTAC
GGCCGCTCGA TCGGCCCGTA CGGCGATTCC GCGTTCATGG AGGTGCTGAC GGCCGCGGCC
AATGCCGGCG TGCTGACCGA TCGCGAGAAA CAGGTTGCGT ATGCATTCAT CTACCAGGCC
GCGCGGCGCT TCGACACGTA CTGGTACGAC CCGTCGCTGC CGACGCCGTC GGTGAACATG
TGGGTCAAGG GCCGCGGCAC CGACACCTAT CGCGGCAAGC CGCGCGTGAT GGGCGAGAAC
TTCAGCCTGC TGCACCAGTA CCTGTACGTG AACGCATGGT GGAACAAGCT CGGCTTCGGC
GGCCAGGCGC CGATGGCCGA TGCGGACTAC CGCGCGTGGC TCGACGCGCT GCCGCGCTAC
ACGCTCACCT GGTACAACCA GCCGGGCGAC GCCGCGCATC CGTACAGCGC CGCGCTGCTC
ACCGTGCGCG ACGGCCGGCG CGTGATCAAC CTGAACCTCA GCCAGGCGCC CGACTACGAC
TCGTACACGC CGTATTACCC GGTGCCGTTC TCCGACAAGC TGATCTACGG CACGACCGAC
CTCGGCTATG CGCTGCTGGT GCCGCAGGTG ACGTACAACG CGAAAACCTA CATTCCGGTC
ACGTACTACA AGAACCTGAA CGTGCAGCAG AGCAACGGCC AGGTGATCGT GTCGTTCGAT
ACGACGAAGT TCCGCCTCGC GTCGAAGAAC GCCGCGTACA CGACGGATCT CGACCTGCAG
GTGCACACGG TGCTGACCTT CGCGCACGGC ACGGTGTCGC GCAGCGATAC GCTGAGTTCG
GGCACGCTCG CCGGCAACCT CGCGATCGAG ACGGACTTCA CGTCGTTCGC GGATTTCGCG
TCGACGCAGG CCAACGGCGA CGGCGTATCG GTGACGTACG CGAACAGCGC CGCGACCGGC
TATGCGACGT CCGGGTTCGA CAACTGCGCG CTGTCCGCCT TCGACACGGC GAACGGCGCG
ACGAATCCGC TGTCGACGAC GCCGATCGGA CAGTTGCATT CGAACTTCGC GTGCACGACG
AAACCGTTCG CACTCGGCGC GGGCGCGACC CGCACGGTCG GGTGGACGCT GAAGTACGCC
GATCCGGCGT GA
|
|---|
| Protein sequence | MHPRSRFALG AALSALSVVF VSACGGNDVT DTPPSPPSST TPTTPTLASN SLQALVYGAP
DTSVPAGTNI PVTMMGQMRA LFDLIRKSPD FTQVVMDLGD GTPVHVLDTN TGDKFLPGKL
ALGLSYILID MKSKNDPQYA SYLATYQTIT TAMMAQSGSN YTYANTSWGE YYYLVALNNL
KAHGMLNEVF SDAMLATLQQ RLTFCDMFGP DASGKTSTCP AAGTPIDIAS LNTAQNYYAV
SYGIAGLRQK LGWSSPSFAS KTDPAVAAMS ARDALLYTLT NHIRNDSSGG FSDEASNTHT
TYYDQARFDR YSTLLIGEVV ERTFEMGNEA NLTPELKGYL RKSVDLILPQ LNANGQGFNY
GRSIGPYGDS AFMEVLTAAA NAGVLTDREK QVAYAFIYQA ARRFDTYWYD PSLPTPSVNM
WVKGRGTDTY RGKPRVMGEN FSLLHQYLYV NAWWNKLGFG GQAPMADADY RAWLDALPRY
TLTWYNQPGD AAHPYSAALL TVRDGRRVIN LNLSQAPDYD SYTPYYPVPF SDKLIYGTTD
LGYALLVPQV TYNAKTYIPV TYYKNLNVQQ SNGQVIVSFD TTKFRLASKN AAYTTDLDLQ
VHTVLTFAHG TVSRSDTLSS GTLAGNLAIE TDFTSFADFA STQANGDGVS VTYANSAATG
YATSGFDNCA LSAFDTANGA TNPLSTTPIG QLHSNFACTT KPFALGAGAT RTVGWTLKYA
DPA
|
|---|
| |