| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4583 |
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| Symbol | |
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| ID | 4451322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 1554226 |
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| End bp | 1555785 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639696639 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_838210 |
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| Protein GI | 116692677 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.169299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTC CCTCGTCTTC AGGCCCGCTG TCGGGCGGCC GGCTCGTCAT CGGCACGATC
GCGGTCTCGC TGGCGATGTT CATGAACGTG CTCGATTCGT CGATCGCGAA CGTCGCGATC
CCGACGATCT CGGGCGACCT CGGCGTGTCG GTCGACGAAG GCACGTGGGT GATCACGATC
TTCGCGGCGG CGAACGCGGT GTCGATTCCG CTGACCGGCT GGCTCACGCA GCGCTTCGGC
CAGGTACGCC TGTTCGTCAC GTCGATCCTG CTGTTCGTGT TCGCGTCGTG GCTGTGCGGG
ATCGCACCGA ACCTGCCGAC GCTGCTCGCC GCGCGAATCC TGCAAGGTGC GGTGGCGGGG
CCGCTCGCGC CGTTGTCGCA GGCGCTGCTG CTCGGCGCGT GGCCACGGCA GAAGTCGTCG
ACGGCGCTCG CGCTGTGGTC GATGACGGCG CTCGTCGGGC CGATCGCGGG GCCGTCGCTC
GGCGGCTGGA TCACGTACGA CTACAACTGG TCGTGGATCT TCTACATCAA CATTCCGGTC
GGCTTCTTCG CGGCGGCCGT CACGTGGTTC GTGTTCCGCG ATCGCGAATC CGCCACGCGC
CGCCTGCCGA TCGACACGGT CGGCCTGCTG CTGCTCGTGC TGTGGGTCGC CTCGCTACAG
ATCATGCTCG ACAAGGGCAA GGATCTCGAC TGGTTCAACT CGCCCGTCGT CGTCGCGCTG
GGCATCGTCG CGCTGATCGG CTTCGCGTTC TTCCTCGTGT GGGAACTGAA CGAAGCCAAT
CCGATCGTCG ACCTGCGCCT CTTCACGCAG CGCAATTTCG CGGGCGGCAC GATCGCGATC
TCCGTCGCGT ATGGGATGTT CTTCGGCACG CTCGTGCTGC TGCCGCAATG GATGCAGGGC
TATCTCGGCT ACCGCGCGGT CGATTCGGGG CTCGCCACCG CGCCGCTCGG GGTGTTCGCG
ATCCTGCTCA CGCCGGTCAT GGGGCGCCTG CTGCCGCGCA CCGATCCGCG TTATATCGCG
ACGCTCGCAT TCGTCGGCTT CGCGGTCGTG TTCATGATGC GCACGACCTT CTACACCGAC
GTGTCGCACT GGGATCTGGT GCTGCCGACG CTGCTGCAAG GCATTCCGAT GGCGATGTTC
TTCGTGCCGC TGACGTCGAT CATCCTGTCC GGGCTGCCGC CGGAAAAGAT TCCGGCGGCA
GCCGGCCTGT CGAATTTCGG CCGCACGTTC TGCGGTGCGG TGGGCACGTC GCTGATCAGC
AATGCGTGGA ACGACCGCAC GATCCTGCAC CACGTGCGGC TCACCGAACA GGCGAGCGTC
ACCAATCCGG TCTTCACGCA GCAGCTCGAC ACGACCCGTT CGCTGCTGCA CCTGAGCCCC
GATTCGGCGC TTGCGTTCTT CAATGCGTCG GTCGATTCGC AGGCGGCCGT GATGGGCTTG
AACGACATCT TCTACGTGTC GGCGATCATC TTCATCGCGA TCATTCCACT CATCTGGATC
ACGAAACCGG CGCGCTCGGG TGGCGGCGAT GCCGATGCGG CGGCGGCCGG CGCGCATTGA
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| Protein sequence | MSSPSSSGPL SGGRLVIGTI AVSLAMFMNV LDSSIANVAI PTISGDLGVS VDEGTWVITI
FAAANAVSIP LTGWLTQRFG QVRLFVTSIL LFVFASWLCG IAPNLPTLLA ARILQGAVAG
PLAPLSQALL LGAWPRQKSS TALALWSMTA LVGPIAGPSL GGWITYDYNW SWIFYINIPV
GFFAAAVTWF VFRDRESATR RLPIDTVGLL LLVLWVASLQ IMLDKGKDLD WFNSPVVVAL
GIVALIGFAF FLVWELNEAN PIVDLRLFTQ RNFAGGTIAI SVAYGMFFGT LVLLPQWMQG
YLGYRAVDSG LATAPLGVFA ILLTPVMGRL LPRTDPRYIA TLAFVGFAVV FMMRTTFYTD
VSHWDLVLPT LLQGIPMAMF FVPLTSIILS GLPPEKIPAA AGLSNFGRTF CGAVGTSLIS
NAWNDRTILH HVRLTEQASV TNPVFTQQLD TTRSLLHLSP DSALAFFNAS VDSQAAVMGL
NDIFYVSAII FIAIIPLIWI TKPARSGGGD ADAAAAGAH
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